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View Structure Prediction Details

Protein: gi|23297558, gi|...
Organism: Arabidopsis thaliana
Length: 246 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|23297558, gi|....

Description E-value Query
Range
Subject
Range
gi|7635460, gi|1... - gi|7635460|emb|CAB88423.1| putative protein [Arabidopsis thaliana], pir||T49131 hypothetical protein...
438.0 [0..1] [246..1]

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Predicted Domain #1
Region A:
Residues: [1-110]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSSKTLTLL VFSAVILTVA LGGDSGGSGN TNTIYSPCSD TRIQRSDGFT FGIAFSSRPS  60
   61 FFINQTVLLS PCDRRLSLAA MNSQFSVFRP KIDEISLLSI NTSAFFPDNY 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [111-246]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GGYMVAFAGR KYAARSIPAF IANSTFIVTS FTLVMEFQKG RLQNLYWKRD GCASCKGNQN  60
   61 FVCLNKQDCA IRTPSCKGRG GAVDCSLGIQ LAFSGTDKHL AVLNSWYEVE NLKQYSLYGL 120
  121 YSNLKSSLTN QFNNFF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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