| Protein: | RBR1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 1013 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RBR1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
1457.0 | [0..1] | [1013..9] |
|
Region A: Residues: [1-59] |
1 11 21 31 41 51
| | | | | |
1 MEEVQPPVTP PIEPNGKRSE ASLLDICEKV LSLDGSTCDE ALKLFTETKR ILSASMSNI
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [60-128] |
1 11 21 31 41 51
| | | | | |
1 GSGTREEVER FWFAFILYSV KRLSVRKEAD GLSVSGDNEF NLCQILRALK LNIVDFFKEL 60
61 PQFVVKAGS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [129-237] |
1 11 21 31 41 51
| | | | | |
1 VLGELYGADW ENRLQAKEVQ ANFVHLSLLS KYYKRGFREF FLTYDANAEK NSANSSTYLL 60
61 DSYRFGWLLF LALRNHAFSR FKDLVTCSNG VVSILAILII HVPCRFRNF
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [238-402] |
1 11 21 31 41 51
| | | | | |
1 SIQDSSRFVK KGDKGVDLVA SLCKIYDASE DELRIVIDKA NNLVETILKK KPSPASECQT 60
61 DKLDNIDPDG LTYFEDLLEE TSISTSLITL EKDYYDGKGE LDERVFINEE DSLLGSGSLS 120
121 AGAVNITGVK RKIDALSSPA RTFISPLSPH KSPAAKTNGI SGATK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [403-610] |
1 11 21 31 41 51
| | | | | |
1 LAATPVSTAM TTAKWLRTVI SPLLPKPSPG LEHFLKSCDR DITNDVTRRA HIILEAIFPN 60
61 SSLGAQCGGG SLQAVDLMDD IWAEQRRLEA CKLYYRVLEA MCKAEAQILH ANNLNSLLTN 120
121 ERFHRCMLAC SAELVLATHK TITMLFPAVL ERTGITAFDL SKVIESFIRH EDSLPRELRR 180
181 HLNSLEERLL ESMVWEKGSS MYNSLIVA
|
| Detection Method: | |
| Confidence: | 80.30103 |
| Match: | 1guxA |
| Description: | Retinoblastoma tumor suppressor domains |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [611-722] |
1 11 21 31 41 51
| | | | | |
1 RPSLALEINQ LGLLAEPMPS LDAIAALINF SDGANHASSV QKHETCPGQN GGIRSPKRLC 60
61 TDYRSILVER NSFTSPVKDR LLALGNVKSK MLPPPLQSAF ASPTRPNPGG GG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [723-934] |
1 11 21 31 41 51
| | | | | |
1 ETCAETGINI FFTKINKLAA VRINGMVERL QLSQQIRESV YCFFQHVLAQ RTSLLFSRHI 60
61 DQIILCCFYG VAKISQMSLT FREIIYNYRK QPQCKPLVFR SVYVDALQCR RQGRIGPDHV 120
121 DIITFYNEIF IPAVKPLLVE LGPVRNDRAV EANNKPEGQC PGSPKVSVFP SVPDMSPKKV 180
181 SAVHNVYVSP LRGSKMDALI SHSTKSYYAC VG
|
| Detection Method: | |
| Confidence: | 62.0 |
| Match: | 1guxB |
| Description: | Retinoblastoma tumor suppressor domains |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [935-1013] |
1 11 21 31 41 51
| | | | | |
1 ESTHAYQSPS KDLSAINNRL NNSSSNRKRT LNFDAEAGMV SDSMVANSLN LQNQNQNQNG 60
61 SDASSSGGAA PLKTEPTDS
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
