Protein: | RBR1_ARATH |
Organism: | Arabidopsis thaliana |
Length: | 1013 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RBR1_ARATH.
Description | E-value | Query Range |
Subject Range |
|
1457.0 | [0..1] | [1013..9] |
Region A: Residues: [1-59] |
1 11 21 31 41 51 | | | | | | 1 MEEVQPPVTP PIEPNGKRSE ASLLDICEKV LSLDGSTCDE ALKLFTETKR ILSASMSNI |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [60-128] |
1 11 21 31 41 51 | | | | | | 1 GSGTREEVER FWFAFILYSV KRLSVRKEAD GLSVSGDNEF NLCQILRALK LNIVDFFKEL 60 61 PQFVVKAGS |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [129-237] |
1 11 21 31 41 51 | | | | | | 1 VLGELYGADW ENRLQAKEVQ ANFVHLSLLS KYYKRGFREF FLTYDANAEK NSANSSTYLL 60 61 DSYRFGWLLF LALRNHAFSR FKDLVTCSNG VVSILAILII HVPCRFRNF |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [238-402] |
1 11 21 31 41 51 | | | | | | 1 SIQDSSRFVK KGDKGVDLVA SLCKIYDASE DELRIVIDKA NNLVETILKK KPSPASECQT 60 61 DKLDNIDPDG LTYFEDLLEE TSISTSLITL EKDYYDGKGE LDERVFINEE DSLLGSGSLS 120 121 AGAVNITGVK RKIDALSSPA RTFISPLSPH KSPAAKTNGI SGATK |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [403-610] |
1 11 21 31 41 51 | | | | | | 1 LAATPVSTAM TTAKWLRTVI SPLLPKPSPG LEHFLKSCDR DITNDVTRRA HIILEAIFPN 60 61 SSLGAQCGGG SLQAVDLMDD IWAEQRRLEA CKLYYRVLEA MCKAEAQILH ANNLNSLLTN 120 121 ERFHRCMLAC SAELVLATHK TITMLFPAVL ERTGITAFDL SKVIESFIRH EDSLPRELRR 180 181 HLNSLEERLL ESMVWEKGSS MYNSLIVA |
Detection Method: | ![]() |
Confidence: | 80.30103 |
Match: | 1guxA |
Description: | Retinoblastoma tumor suppressor domains |
Matching Structure (courtesy of the PDB):![]() |
Region A: Residues: [611-722] |
1 11 21 31 41 51 | | | | | | 1 RPSLALEINQ LGLLAEPMPS LDAIAALINF SDGANHASSV QKHETCPGQN GGIRSPKRLC 60 61 TDYRSILVER NSFTSPVKDR LLALGNVKSK MLPPPLQSAF ASPTRPNPGG GG |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [723-934] |
1 11 21 31 41 51 | | | | | | 1 ETCAETGINI FFTKINKLAA VRINGMVERL QLSQQIRESV YCFFQHVLAQ RTSLLFSRHI 60 61 DQIILCCFYG VAKISQMSLT FREIIYNYRK QPQCKPLVFR SVYVDALQCR RQGRIGPDHV 120 121 DIITFYNEIF IPAVKPLLVE LGPVRNDRAV EANNKPEGQC PGSPKVSVFP SVPDMSPKKV 180 181 SAVHNVYVSP LRGSKMDALI SHSTKSYYAC VG |
Detection Method: | ![]() |
Confidence: | 62.0 |
Match: | 1guxB |
Description: | Retinoblastoma tumor suppressor domains |
Matching Structure (courtesy of the PDB):![]() |
Region A: Residues: [935-1013] |
1 11 21 31 41 51 | | | | | | 1 ESTHAYQSPS KDLSAINNRL NNSSSNRKRT LNFDAEAGMV SDSMVANSLN LQNQNQNQNG 60 61 SDASSSGGAA PLKTEPTDS |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.