| Protein: | CSN7_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 260 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CSN7_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
266.0 | [0..3] | [259..247] |
|
Region A: Residues: [1-72] |
1 11 21 31 41 51
| | | | | |
1 MDIEQKQAEI IDQLVKRAST CKSEALGPLI IEATSHPSLF AFSEILALPN VAQLEGTTDS 60
61 VYLDLLRLFA HG
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.729 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.706 | N/A | N/A | d.68.3 | SirA-like |
| View | Download | 0.665 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.652 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.640 | N/A | N/A | a.4.1 | Homeodomain-like |
|
Region A: Residues: [73-193] |
1 11 21 31 41 51
| | | | | |
1 TWGDYKCNAT RLPHLSPDQI LKLKQLTVLT LAESNKVLPY DTLMVELDVS NVRELEDFLI 60
61 NECMYAGIVR GKLDQLKRCF EVPFAAGRDL RPGQLGNMLH TLSNWLNTSE NLLISIQDKI 120
121 K
|
| Detection Method: | |
| Confidence: | 2.05 |
| Match: | 1ufmA |
| Description: | Solution structure of the PCI domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.683379929086364 | bayes_pls_golite062009 |
| transcription regulator activity | 0.16959343932447 | bayes_pls_golite062009 |
| nucleic acid binding | 0.0949481158963694 | bayes_pls_golite062009 |
| DNA binding | 0.00746597740509714 | bayes_pls_golite062009 |
|
Region A: Residues: [194-260] |
1 11 21 31 41 51
| | | | | |
1 WADNMSEMDK KHRKEAEEGV EEVKKSLSMK GDVDIRGNKE MFGEPSGVMD YEEDGIRPKR 60
61 RRHPVTR
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.523 | g.10.1 | Hairpin loop containing domain-like |
| View | Download | 0.510 | d.74.2 | C-terminal domain of arginine repressor |
| View | Download | 0.399 | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
| View | Download | 0.394 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.359 | a.74.1 | Cyclin-like |
