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View Structure Prediction Details

Protein: gi|17933297, gi|...
Organism: Arabidopsis thaliana
Length: 228 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|17933297, gi|....

Description E-value Query
Range
Subject
Range
CE03066 - WBGene00007955 status:Partially_confirmed
300.0 [0..1] [217..12]

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Predicted Domain #1
Region A:
Residues: [1-228]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDRAQLILLG LPIFLFCSDL FNLFTPPPPK PQPHRPHQPP HIPHQHRPNA IIPETLDFPS  60
   61 QKTSGLGGAI GYGNTVEINF CVSCSYKGTA VTMKKMLETA FPGLDVILAN YPPPAPKRLL 120
  121 AKVVPVVQMG VIGMIVAGDR ILPMIGITNP PAWFHSLRAN RFGSMASTWL IGNFLQSYLQ 180
  181 SSGAFEVHCN GEPVFSKLKE GRFPGEIELR DLISKTLTRP SILTGSSY

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 3.07
Match: 2fa8A
Description: Crystal Structure of the Putative Selenoprotein W-related family Protein from Agrobacterium tumefaciens
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.646676412582618 bayes_pls_golite062009
binding 0.43159312647687 bayes_pls_golite062009
transcription regulator activity 0.391333306515858 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle