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View Structure Prediction Details

Protein: PRP38_ARATH
Organism: Arabidopsis thaliana
Length: 355 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PRP38_ARATH.

Description E-value Query
Range
Subject
Range
gi|47212452 - gi|47212452|emb|CAF94104.1| unnamed protein product [Tetraodon nigroviridis]
255.0 [0..1] [226..1]

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Predicted Domain #1
Region A:
Residues: [1-202]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANRTDPLAK NIRGTNPQNL VEKIVRTKIY QHTFWKEQCF GLTAETLVDK AMELDHLGGT  60
   61 FGGSRKPTPF LCLILKMLQI QPEKEIVVEF IKNDDYKYVR ILGAFYLRLT GTDVDVYRYL 120
  121 EPLYNDYRKV RQKLSDGKFS LTHVDEVIEE LLTKDYSCDI AMPRLKKRWT LEQNGLLEPR 180
  181 KSVLEDDFEE EEEKEENEGI AD

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 63.958607
Match: PF03371.6
Description: No description for PF03371.6 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [203-355]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GSEDEMDQRR KSPERERERD RDRRRDSHRH RDRDYDRDYD MDRDHDRDYE RERGHGRDRD  60
   61 RERDRDHYRE RDRDRERGRD RERDRRDRAR RRSRSRSRDR KRHETDDVRD REEPKKKKEK 120
  121 KEKMKEDGTD HPNPEIAEMN RLRASLGMKP LRD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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