| Protein: | TFB4_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 301 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TFB4_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
378.0 | [0..10] | [284..5] |
|
Region A: Residues: [1-301] |
1 11 21 31 41 51
| | | | | |
1 MPAIASKQYS DDVSLLVLLL DTNPLFWSTT SITFSQFLSH VLAFLNAVLG LNQLNQVVVI 60
61 ATGYSSCDYI YDSSLTSNHG NFESNGTGMP AIFGSLLKKL EEFVTKDEEL SKEEVSEDRI 120
121 PSCLLSGSLS MALCYIQRVF RSGHLHPQPR ILCLQGSPDG PEQYVAVMNS IFSAQRLMVP 180
181 IDSCYIGVQN SAFLQQASYI TGGVHHTPKQ LDGLFQYLTT IFATDLHSRG FVQLPKPIGV 240
241 DFRASCFCHK KTIDMGYICS VCLSIFCEHH KKCSTCGSVF GQSKLDDASS ASDKKRKAPS 300
301 T
|
| Detection Method: |  |
| Confidence: | 0.951 |
| Match: | 1txvB |
| Description: | Structural basis for allostery in integrins and binding of ligand-mimetic therapeutics to the platelet receptor for fibrinogen |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.68315152218267 | bayes_pls_golite062009 |
| nucleic acid binding | 2.10023916482665 | bayes_pls_golite062009 |
| DNA binding | 1.9295508897092 | bayes_pls_golite062009 |
| protein binding | 1.42792331963866 | bayes_pls_golite062009 |
| hydrolase activity | 0.589248272940562 | bayes_pls_golite062009 |
| structure-specific DNA binding | 0.446181458443121 | bayes_pls_golite062009 |
| protein complex binding | 0.0576912134524816 | bayes_pls_golite062009 |
| catalytic activity | 0.0380261580236634 | bayes_pls_golite062009 |
