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View Structure Prediction Details

Protein: CESA4_ARATH
Organism: Arabidopsis thaliana
Length: 1049 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for CESA4_ARATH.

Predicted Domain #1
Region A:
Residues: [1-75]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPNTMASFD DEHRHSSFSA KICKVCGDEV KDDDNGQTFV ACHVCVYPVC KPCYEYERSN  60
   61 GNKCCPQCNT LYKRH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 31.522879
Match: 1weoA
Description: Solution structure of RING-finger in the catalytic subunit (IRX3) of cellulose synthase
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [76-186]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KGSPKIAGDE ENNGPDDSDD ELNIKYRQDG SSIHQNFAYG SENGDYNSKQ QWRPNGRAFS  60
   61 STGSVLGKDF EAERDGYTDA EWKERVDKWK ARQEKRGLVT KGEQTNEDKE D

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [187-363]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DEEEYLDAEA RQPLWRKVPI SSSKISPYRI VIVLRLVILV FFFRFRILTP AKDAYPLWLI  60
   61 SVICEIWFAL SWILDQFPKW FPINRETYLD RLSMRFERDG EKNKLAPVDV FVSTVDPLKE 120
  121 PPIITANTIL SILAVDYPVN KVSCYVSDDG ASMLLFDTLS ETSEFARRWV PFCKKYN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [364-558]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VEPRAPEFYF SEKIDYLKDK VQTTFVKDRR AMKREYEEFK VRINALVAKA QKKPEEGWVM  60
   61 QDGTPWPGNN TRDHPGMIQV YLGKEGAFDI DGNELPRLVY VSREKRPGYA HHKKAGAMNA 120
  121 MVRVSAVLTN APFMLNLDCD HYINNSKAIR ESMCFLMDPQ LGKKLCYVQF PQRFDGIDLN 180
  181 DRYANRNIVF FDINM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 3.69897
Match: 3bcvA
Description: No description for 3bcvA was found.

Predicted Domain #5
Region A:
Residues: [559-620]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RGLDGIQGPV YVGTGCVFNR PALYGYEPPV SEKRKKMTCD CWPSWICCCC GGGNRNHKSD  60
   61 SS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [621-790]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KKKSGIKSLF SKLKKKTKKK SDDKTMSSYS RKRSSTEAIF DLEDIEEGLE GYDELEKSSL  60
   61 MSQKNFEKRF GMSPVFIAST LMENGGLPEA TNTSSLIKEA IHVISCGYEE KTEWGKEIGW 120
  121 IYGSVTEDIL TGFRMHCRGW KSVYCMPKRP AFKGSAPINL SDRLHQVLRW 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #7
Region A:
Residues: [791-882]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ALGSVEIFFS RHCPLWYAWG GKLKILERLA YINTIVYPFT SIPLLAYCTI PAVCLLTGKF  60
   61 IIPTINNFAS IWFLALFLSI IATAILELRW SG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #8
Region A:
Residues: [883-1049]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VSINDLWRNE QFWVIGGVSA HLFAVFQGLL KVLFGVDTNF TVTSKGASDE ADEFGDLYLF  60
   61 KWTTLLIPPT TLIILNMVGV VAGVSDAINN GYGSWGPLFG KLFFAFWVIV HLYPFLKGLM 120
  121 GRQNRTPTIV VLWSILLASI FSLVWVRIDP FLPKQTGPLL KQCGVDC

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle