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View Structure Prediction Details

Protein: CESA4_ARATH
Organism: Arabidopsis thaliana
Length: 1049 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for CESA4_ARATH.

Predicted Domain #1
Region A:
Residues: [1-75]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPNTMASFD DEHRHSSFSA KICKVCGDEV KDDDNGQTFV ACHVCVYPVC KPCYEYERSN  60
   61 GNKCCPQCNT LYKRH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 31.522879
Match: 1weoA
Description: Solution structure of RING-finger in the catalytic subunit (IRX3) of cellulose synthase
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [76-186]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KGSPKIAGDE ENNGPDDSDD ELNIKYRQDG SSIHQNFAYG SENGDYNSKQ QWRPNGRAFS  60
   61 STGSVLGKDF EAERDGYTDA EWKERVDKWK ARQEKRGLVT KGEQTNEDKE D

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [187-363]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DEEEYLDAEA RQPLWRKVPI SSSKISPYRI VIVLRLVILV FFFRFRILTP AKDAYPLWLI  60
   61 SVICEIWFAL SWILDQFPKW FPINRETYLD RLSMRFERDG EKNKLAPVDV FVSTVDPLKE 120
  121 PPIITANTIL SILAVDYPVN KVSCYVSDDG ASMLLFDTLS ETSEFARRWV PFCKKYN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [364-558]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VEPRAPEFYF SEKIDYLKDK VQTTFVKDRR AMKREYEEFK VRINALVAKA QKKPEEGWVM  60
   61 QDGTPWPGNN TRDHPGMIQV YLGKEGAFDI DGNELPRLVY VSREKRPGYA HHKKAGAMNA 120
  121 MVRVSAVLTN APFMLNLDCD HYINNSKAIR ESMCFLMDPQ LGKKLCYVQF PQRFDGIDLN 180
  181 DRYANRNIVF FDINM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 3.69897
Match: 3bcvA
Description: No description for 3bcvA was found.

Predicted Domain #5
Region A:
Residues: [559-620]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RGLDGIQGPV YVGTGCVFNR PALYGYEPPV SEKRKKMTCD CWPSWICCCC GGGNRNHKSD  60
   61 SS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [621-790]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KKKSGIKSLF SKLKKKTKKK SDDKTMSSYS RKRSSTEAIF DLEDIEEGLE GYDELEKSSL  60
   61 MSQKNFEKRF GMSPVFIAST LMENGGLPEA TNTSSLIKEA IHVISCGYEE KTEWGKEIGW 120
  121 IYGSVTEDIL TGFRMHCRGW KSVYCMPKRP AFKGSAPINL SDRLHQVLRW 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #7
Region A:
Residues: [791-882]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ALGSVEIFFS RHCPLWYAWG GKLKILERLA YINTIVYPFT SIPLLAYCTI PAVCLLTGKF  60
   61 IIPTINNFAS IWFLALFLSI IATAILELRW SG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #8
Region A:
Residues: [883-1049]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VSINDLWRNE QFWVIGGVSA HLFAVFQGLL KVLFGVDTNF TVTSKGASDE ADEFGDLYLF  60
   61 KWTTLLIPPT TLIILNMVGV VAGVSDAINN GYGSWGPLFG KLFFAFWVIV HLYPFLKGLM 120
  121 GRQNRTPTIV VLWSILLASI FSLVWVRIDP FLPKQTGPLL KQCGVDC

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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