| Protein: | IDN2_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 647 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for IDN2_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
296.0 | [0..73] | [643..2330] |
|
|
243.0 | [0..61] | [646..1290] |
|
|
242.0 | [0..57] | [643..202] |
|
|
241.0 | [0..53] | [646..1255] |
|
|
240.0 | [0..61] | [646..1319] |
|
|
240.0 | [0..61] | [646..1319] |
|
|
240.0 | [0..73] | [647..1331] |
|
Region A: Residues: [1-120] |
1 11 21 31 41 51
| | | | | |
1 MGSTVILSSD DEDSDISESE MDEYGDKMYL NLKGGKLKVR LSPQAFICPY CPNKKKTSFQ 60
61 YKDLLQHASG VGNSNSDKRS AKEKASHLAL VKYLQQDLAD SASEAEPSSK RQKNGNPIQD 120
121
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.636 | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
| View | Download | 0.514 | c.121.1 | Ribose/Galactose isomerase RpiB/AlsB |
| View | Download | 0.514 | c.121.1 | Ribose/Galactose isomerase RpiB/AlsB |
| View | Download | 0.505 | a.118.8 | TPR-like |
| View | Download | 0.464 | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
| View | Download | 0.421 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.420 | a.118.9 | ENTH/VHS domain |
| View | Download | 0.330 | a.2.3 | Chaperone J-domain |
| View | Download | 0.330 | a.47.2 | t-snare proteins |
| View | Download | 0.328 | a.118.1 | ARM repeat |
| View | Download | 0.262 | b.34.16 | Description not found. |
|
Region A: Residues: [121-189] |
1 11 21 31 41 51
| | | | | |
1 CDHDEKLVYP WKGIVVNIPT TKAQDGRSAG ESGSKLRDEY ILRGFNPTRV RPLWNYLGHS 60
61 GTAIVEFNK
|
| Detection Method: | |
| Confidence: | 23.408935 |
| Match: | PF03468.5 |
| Description: | No description for PF03468.5 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [190-513] |
1 11 21 31 41 51
| | | | | |
1 DWNGLHNGLL FDKAYTVDGH GKKDWLKKDG PKLGLYGWIA RADDYNGNNI IGENLRKTGD 60
61 LKTIAELTEE EARKQELLVQ NLRQLVEEKK KDMKEIEELC SVKSEELNQL MEEKEKNQQK 120
121 HYRELNAIQE RTMSHIQKIV DDHEKLKRLL ESERKKLEIK CNELAKREVH NGTERMKLSE 180
181 DLEQNASKNS SLELAAMEQQ KADEEVKKLA EDQRRQKEEL HEKIIRLERQ RDQKQAIELE 240
241 VEQLKGQLNV MKHMASDGDA EVVKEVDIIF KDLGEKEAQL ADLDKFNQTL ILRERRTNDE 300
301 LQEAHKELVN IMKEWNTNIG VKRM
|
| Detection Method: | |
| Confidence: | 17.045757 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [514-647] |
1 11 21 31 41 51
| | | | | |
1 GELVTKPFVD AMQQKYCQQD VEDRAVEVLQ LWEHYLKDSD WHPFKRVKLE NEDREVEVID 60
61 DRDEKLRELK ADLGDGPYNA VTKALLEINE YNPSGRYITT ELWNFKADKK ATLEEGVTCL 120
121 LDQWEKAKRK RGMA
|
| Detection Method: | |
| Confidence: | 79.657577 |
| Match: | PF03469.5 |
| Description: | No description for PF03469.5 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.588 | N/A | N/A | d.326.1 | Description not found. |
| View | Download | 0.477 | N/A | N/A | d.52.3 | Prokaryotic type KH domain (KH-domain type II) |
| View | Download | 0.474 | N/A | N/A | d.58.4 | Dimeric alpha+beta barrel |
| View | Download | 0.474 | N/A | N/A | d.58.4 | Dimeric alpha+beta barrel |
| View | Download | 0.453 | N/A | N/A | d.52.3 | Prokaryotic type KH domain (KH-domain type II) |
| View | Download | 0.442 | N/A | N/A | d.58.4 | Dimeric alpha+beta barrel |
| View | Download | 0.442 | N/A | N/A | d.58.4 | Dimeric alpha+beta barrel |
| View | Download | 0.419 | N/A | N/A | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.417 | N/A | N/A | d.52.6 | BolA-like |
| View | Download | 0.396 | N/A | N/A | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.316 | N/A | N/A | c.47.1 | Thioredoxin-like |
| View | Download | 0.271 | N/A | N/A | d.110.4 | SNARE-like |
