| Protein: | gi|30687819, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 425 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30687819, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
663.0 | [0..72] | [425..171] |
|
|
221.0 | [0..179] | [378..137] |
|
Region A: Residues: [1-172] |
1 11 21 31 41 51
| | | | | |
1 MSPLVAGNRH FSVSALRATL NHRRNLLRRN VRETILPVKN KRKSRRFSDL CSMSIRIRVK 60
61 RKKTKERKSS KITKGTSGNK IKRKRGRPRK IRNPSEENEV LDLTGEASTY VFVDKTSSNL 120
121 GMVSRVGSSG ISLDSNSVKR KRGRPPKNKE EIMNLEKRDS AIVNISAFDK EE
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [173-317] |
1 11 21 31 41 51
| | | | | |
1 LVVNLENREG TIVDLSALAS VSEDPYEEEL RRITVGLKTK EEILGFLEQL NGEWVNIGKK 60
61 KKVVNACDYG GYLPRGWRLM LYIKRKGSNL LLACRRYISP DGQQFETCKE VSTYLRSLLE 120
121 SPSKNQHYYL QSDNKTLGQQ PVIAN
|
| Detection Method: | |
| Confidence: | 1.04 |
| Match: | 1ub1A |
| Description: | Solution structure of the matrix attachment region-binding domain of chicken MeCP2 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [318-425] |
1 11 21 31 41 51
| | | | | |
1 ESLLGNSDSM DSETMQYLES GRTSSEVFEE AKAVENGNEA DRVKTSLMQK DDNADFLNGV 60
61 EDNDDDMKKR DGNMENLATL SNSEMTKSLP TTTNELQQYF SSQINRVQ
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.441 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.441 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.331 | a.77.1 | DEATH domain |
| View | Download | 0.301 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.301 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.285 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.268 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.240 | a.246.2 | Description not found. |
