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Protein Overview: MBD8_ARATH

General Information:
Name(s) found: MBD8_ARATH [Swiss-Prot]
Description(s) found:
Found 14 descriptions.
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  • Methyl-CpG-binding domain-containing protein 8 OS=Arabidopsis thaliana GN=MBD8 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 524 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA]
    Biological Process: biological_process [ND]
    Molecular Function: methyl-CpG binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDDGDLGNNH HNFLGGAGNR LSAESLPLID TRLLSQSELR ALSQCSSLSP SSSASLAASA  60
   61 GGDDDLTPKI DRSVFNESAG SRKQTFLRLR LARHPQPPEE PPSPQRQRDD SSREEQTQVA 120
  121 SLLRSLFNVD SNQSKEEEDE GEEELEDNEG QIHYNSYVYQ RPNLDSIQNV LIQGTSGNKI 180
  181 KRKRGRPRKI RNPSEENEVL DLTGEASTYV FVDKTSSNLG MVSRVGSSGI SLDSNSVKRK 240
  241 RGRPPKNKEE IMNLEKRDSA IVNISAFDKE ELVVNLENRE GTIVDLSALA SVSEDPYEEE 300
  301 LRRITVGLKT KEEILGFLEQ LNGEWVNIGK KKKVVNACDY GGYLPRGWRL MLYIKRKGSN 360
  361 LLLACRRYIS PDGQQFETCK EVSTYLRSLL ESPSKNQHYY LQSDNKTLGQ QPVIANESLL 420
  421 GNSDSMDSET MQYLESGRTS SEVFEEAKAV ENGNEADRVK TSLMQKDDNA DFLNGVEDND 480
  481 DDMKKRDGNM ENLATLSNSE MTKSLPTTTN ELQQYFSSQI NRVQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..278] deduced N/A No confident structure predictions are available.
    2 View Details [279..416] FFAS03 1.02 Solution structure of the matrix attachment region-binding domain of chicken MeCP2
    3 View Details [417..524] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle