YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: HIBC5_ARATH
Organism: Arabidopsis thaliana
Length: 409 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HIBC5_ARATH.

Description E-value Query
Range
Subject
Range
HIBCH_CHICK - 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Gallus gallus GN=HIBCH PE=2 SV=1
356.0 [0..9] [395..2]

Back

Predicted Domain #1
Region A:
Residues: [1-292]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQTVKALRRV SEPLQWVRSV SYGRRFSALP NYSASDADFE DQVLVEGKAK SRAAILNNPS  60
   61 SLNALSAPMV GRLKRLYESW EENPAISFVL MKGSGKTFCS GADVLSLYHS INEGNTEESK 120
  121 LFFENLYKFV YLQGTYLKPN IAIMDGVTMG CGGGISLPGM FRVATDKTVL AHPEVQIGFH 180
  181 PDAGASYYLS RLPGYLGEYL ALTGQKLNGV EMIACGLATH YCLNARLPLI EERIGKLLTD 240
  241 DPAVIEDSLA QYGDLVYPDS SSVLHKIELI DKYFGLDTVE EIIEAMENEA AN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 71.045757
Match: 2iexA
Description: No description for 2iexA was found.

Predicted Domain #2
Region A:
Residues: [293-409]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SCNEWCKKTL KQIKEASPLS LKITLQSIRE GRFQTLDQCL THEYRISICG VSKVVSGDFC  60
   61 EGIRARLVDK DFAPKWDPPR LEDVSKDMVD CYFTPASELD DSDSELKLPT AQREPYF

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.88
Match: 1nzyA
Description: 4-Chlorobenzoyl-CoA dehalogenase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle