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View Structure Prediction Details

Protein: TYW1_ARATH
Organism: Arabidopsis thaliana
Length: 647 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TYW1_ARATH.

Description E-value Query
Range
Subject
Range
gi|25406422, gi|... - pir||C96782 unknown protein F22H5.13 [imported] - Arabidopsis thaliana, gi|10092280|gb|AAG12693.1|A...
477.0 [0..1] [647..1]

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Predicted Domain #1
Region A:
Residues: [1-647]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTTSSVRVR LAFVALLSAT TFYCIHKYRR LKHLKNLSLN PSSTLKASRG KIFFISQTGT  60
   61 AKALAQRLHE LCASNDIAFD IVDPHSYEPE DLPKETLVLF IASTWDGGKP PKNGEFLVNW 120
  121 LGESAEDFRV GSLLLSDCKF AVFGVGSRAY GESYNAVAKE LSSRMIGLGG LEMIPVGEGD 180
  181 VDDGELDRAF QDWCDGVIRV LKGGSAQETN GVSQQIGAVE DDLEYYDSTD EEDEDNDADG 240
  241 GIVDLEDIAG KAPSKRNGVV KVTKVDGKKE MVTPVIRASL TKQGYKIIGS HSGVKICRWT 300
  301 KSQLRGRGGC YKHSFYGIES HRCMETTPSL ACANKCVFCW RHHTNPVGKS WQWKMDEPSV 360
  361 IVKGALDLHK NMIKQMKGVP GVTPEKLQEG LNPRHCALSL VGEPIMYPEI NALVDELHGR 420
  421 RISTFLVTNA QFPEKILMMK PITQLYVSVD AATKESLKAI DRPLFADFWE RFIDSLKALQ 480
  481 EKQQRTVYRL TLVKGWNTEE LDAYFNLFSI GKPDFIEIKG VTYCGSSATS KLTMENVPWH 540
  541 TDVKAFSEAL SLKSNGEYEV ACEHAHSCCV LLGRTEKFKV DGKWFTWIDY EKFHDLVASG 600
  601 EPFTSTDYMA QTPSWAVYGA QEGGFDPGQL RYKKERNHPP KPQAVLA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 58.221849
Match: 1j9zA
Description: NADPH-cytochrome p450 reductase; NADPH-cytochrome p450 reductase, N-terminal domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.45374095556065 bayes_pls_golite062009
transferase activity 1.15480450573972 bayes_pls_golite062009
binding 0.73972626785558 bayes_pls_golite062009
transcription regulator activity 0.62629924591908 bayes_pls_golite062009
adenyl nucleotide binding 0.003773319796959 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle