| Protein: | LPAH2_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 717 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LPAH2_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
676.0 | [0..2] | [717..1] |
|
|
543.0 | [0..7] | [617..11] |
|
|
405.0 | [0..10] | [415..104] |
|
|
389.0 | [0..10] | [453..104] |
|
|
362.0 | [0..8] | [450..159] |
|
|
351.0 | [0..69] | [407..8] |
|
Region A: Residues: [1-167] |
1 11 21 31 41 51
| | | | | |
1 MMTEATKVLY IVVREEGDDD DNNGDDSFRY TRPVLQSTLQ LMGCKARHAF KISRRVFELI 60
61 RSEGSCNTSP ENGKEPEFAK EVGGSTCVEK LNCLVVAGDV DKNKSKPFEM YKRRTTVVVS 120
121 REIFVDVVCD ALAEYKYVGR DQRADLILAC RIRERKESVT VLLCGTS
|
| Detection Method: |  |
| Confidence: | 3.39794 |
| Match: | 1j8mF |
| Description: | Signal sequence recognition protein Ffh; GTPase domain of the signal sequence recognition protein Ffh |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [168-259] |
1 11 21 31 41 51
| | | | | |
1 GCGKSTLSAL LGSRLGITTV VSTDSIRHMM RSFADEKQNP LLWASTYHAG EYLDPVAVAE 60
61 SKAKRKAKKL KGSRGVNSNA QKTDAGSNSS TT
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [260-408] |
1 11 21 31 41 51
| | | | | |
1 ELLSHKQMAI EGYKAQSEMV IDSLDRLITT WEERNESVVV EGVHLSLNFV MGLMKKHPSI 60
61 VPFMVYIANE EKHLERFAVR AKYMTLDPAK NKYVKYIRNI RTIQDYLCKR ADKHLVPKIN 120
121 NTNVDKSVAT IHATVFGCLR RRETGEKLY
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [409-528] |
1 11 21 31 41 51
| | | | | |
1 DTTTNTVSVI DDEHRNQCAA NSLTSKGMFQ VIQRQGSSRR FMALCNTDGT VAKTWPVASV 60
61 GKIRKPVVNT EMDDGTEHQL HKAEPVNLQF GHFGISAWPS DGATSHAGSV DDLRADIIET 120
121
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [529-717] |
1 11 21 31 41 51
| | | | | |
1 GSRHYSSCCS SPRTSDGPSK ELMEEQSVNG SDEDDEEGDD DFHEPDSDED LSDNNDERNR 60
61 DEIGSVDEES TKSDEEYDDL AMEDKSYWTD NEEEESRDTI SMVSQNNHNE ASKTNKDDKY 120
121 SQNLDLFLKT TNQPLTESLE LTSEYRNRMG VAASDKAKMR KRSLSIPPVG KHGSIIDDQI 180
181 LANQTDSVL
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
