| Protein: | gi|20465975, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 366 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|20465975, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
290.0 | [0..1] | [363..1] |
|
Region A: Residues: [1-148] |
1 11 21 31 41 51
| | | | | |
1 MGRHSCCYKQ KLRKGLWSPE EDEKLLTHIT NHGHGCWSSV PKLAGLQRCG KSCRLRWINY 60
61 LRPDLKRGAF SPEEENLIVE LHAVLGNRWS QIASRLPGRT DNEIKNLWNS SIKKKLKQRG 120
121 IDPNTHKPIS EVESFSDKDK PTTSNNKR
|
| Detection Method: |  |
| Confidence: | 41.09691 |
| Match: | 1h88C |
| Description: | c-Myb, DNA-binding domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.334577365229545 | bayes_pls_golite062009 |
| transcription regulator activity | 0.0696342306231097 | bayes_pls_golite062009 |
|
Region A: Residues: [149-366] |
1 11 21 31 41 51
| | | | | |
1 SGNDHKSPSS SSATNQDFFL ERPSDLSDYF GFQKLNFNSN LGLSVTTDSS LCSMIPPQFS 60
61 PGNMVGSVLQ TPVCVKPSIS LPPDNNSSSP ISGGDHVKLA APNWEFQTNN NNTSNFFDNG 120
121 GFSWSIPNSS TSSSQVKPNH NFEEIKWSEY LNTPFFIGST VQSQTSQPIY IKSETDYLAN 180
181 VSNMTDPWSQ NENLGTTETS DVFSKDLQRM AVSFGQSL
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
