| Protein: | DEGP5_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 323 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DEGP5_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
239.0 | [0..3] | [320..1] |
|
|
234.0 | [0..35] | [323..3] |
|
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229.0 | [0..71] | [323..15] |
|
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226.0 | [0..42] | [323..6] |
|
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223.0 | [0..48] | [323..5] |
|
|
222.0 | [0..37] | [323..1] |
|
|
222.0 | [0..56] | [323..3] |
|
Region A: Residues: [1-83] |
1 11 21 31 41 51
| | | | | |
1 MTMALASSKA FSSIFNTLSP INQSKFVLAC SGSNHVDVID RRRRIMIFGS SLALTSSLLG 60
61 SNQQRLPMES AIALEQFKEK EEE
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.661 | d.93.1 | SH2 domain |
| View | Download | 0.660 | b.114.1 | N-utilization substance G protein NusG, insert domain |
| View | Download | 0.660 | b.114.1 | N-utilization substance G protein NusG, insert domain |
| View | Download | 0.658 | d.58.1 | 4Fe-4S ferredoxins |
| View | Download | 0.658 | d.58.1 | 4Fe-4S ferredoxins |
| View | Download | 0.648 | b.61.3 | D-aminopeptidase, middle and C-terminal domains |
| View | Download | 0.648 | b.61.3 | D-aminopeptidase, middle and C-terminal domains |
| View | Download | 0.641 | b.61.3 | D-aminopeptidase, middle and C-terminal domains |
| View | Download | 0.641 | b.61.3 | D-aminopeptidase, middle and C-terminal domains |
| View | Download | 0.600 | d.50.1 | dsRNA-binding domain-like |
| View | Download | 0.502 | c.47.1 | Thioredoxin-like |
| View | Download | 0.467 | d.49.1 | Signal recognition particle alu RNA binding heterodimer, SRP9/14 |
| View | Download | 0.340 | d.50.1 | dsRNA-binding domain-like |
| View | Download | 0.294 | d.49.1 | Signal recognition particle alu RNA binding heterodimer, SRP9/14 |
| View | Download | 0.267 | d.50.1 | dsRNA-binding domain-like |
|
Region A: Residues: [84-323] |
1 11 21 31 41 51
| | | | | |
1 LEEEEERNVN LFQKTSPSVV YIEAIELPKT SSGDILTDEE NGKIEGTGSG FVWDKLGHIV 60
61 TNYHVIAKLA TDQFGLQRCK VSLVDAKGTR FSKEGKIVGL DPDNDLAVLK IETEGRELNP 120
121 VVLGTSNDLR VGQSCFAIGN PYGYENTLTI GVVSGLGREI PSPNGKSISE AIQTDADINS 180
181 GNSGGPLLDS YGHTIGVNTA TFTRKGSGMS SGVNFAIPID TVVRTVPYLI VYGTAYRDRF 240
241
|
| Detection Method: | |
| Confidence: | 53.0 |
| Match: | 1l1jA |
| Description: | Protease Do (DegP, HtrA), catalytic domain |
Matching Structure (courtesy of the PDB): |
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