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View Structure Prediction Details

Protein: UAH_ARATH
Organism: Arabidopsis thaliana
Length: 476 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for UAH_ARATH.

Description E-value Query
Range
Subject
Range
gi|254237324, gi... - gi|84318637|ref|ZP_00967058.1| COG0624: Acetylornithine deacetylase/Succinyl-diaminopimelate desucci...
276.0 [0..61] [472..15]

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Predicted Domain #1
Region A:
Residues: [1-476]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESLKRFLCS IALLLISLLL PSSLAQQQQH ESIRTMEDFS GYPIHEPGQF GSINLASSLS  60
   61 VDAPGLQNQI DELSSFSDAP SPSVTRVLYT DKDVSARRYV KNLMALAGLT VREDAVGNIF 120
  121 GKWDGLEPNL PAVATGSHID AIPYSGKYDG VVGVLGAIEA INVLKRSGFK PKRSLEIILF 180
  181 TSEEPTRFGI SCLGSRLLAG SKELAEALKT TVVDGQNVSF IEAARSAGYA EDKDDDLSSV 240
  241 FLKKGSYFAF LELHIEQGPI LEDEGLDIGV VTAIAAPASL KVEFEGNGGH AGAVLMPYRN 300
  301 DAGLAAAELA LAVEKHVLES ESIDTVGTVG ILELHPGAIN SIPSKSHLEI DTRDIDEARR 360
  361 NTVIKKIQES ANTIAKKRKV KLSEFKIVNQ DPPALSDKLV IKKMAEAATE LNLSHKMMIS 420
  421 RAYHDSLFMA RISPMGMIFI PCYKGYSHKP EEYSSPEDMA NGVKVLSLTL AKLSLD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 66.154902
Match: 1z2lA
Description: Crystal structure of Allantoate-amidohydrolase from E.coli K12 in complex with substrate Allantoate
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity 3.0609849976664 bayes_pls_golite062009
peptidase activity 3.04706302825019 bayes_pls_golite062009
catalytic activity 2.3710874246093 bayes_pls_golite062009
peptidase activity, acting on L-amino acid peptides 2.30644893326426 bayes_pls_golite062009
exopeptidase activity 1.25673143627992 bayes_pls_golite062009
succinyl-diaminopimelate desuccinylase activity 0.851637991746991 bayes_pls_golite062009
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds 0.818684394421989 bayes_pls_golite062009
carboxypeptidase activity 0.76593160329727 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle