| Protein: | KIN13_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 794 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for KIN13_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
402.0 | [0..1] | [794..21] |
|
Region A: Residues: [1-115] |
1 11 21 31 41 51
| | | | | |
1 MGGQMQQNNA AAATALYDGA LPTNDAGDAV MARWLQSAGL QHLASPVAST GNDQRHLPNL 60
61 LMQGYGAQTA EEKQRLFQLM RNLNFNGEST SESYTPTAHT SAAMPSSEGF FSPEF
|
| Detection Method: |  |
| Confidence: | 1.01 |
| Match: | 2f3nA |
| Description: | Crystal Structure of the native Shank SAM domain. |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 3.19486995724826 | bayes_pls_golite062009 |
| protein binding | 3.01479451996893 | bayes_pls_golite062009 |
| transcription regulator activity | 1.4352733243042 | bayes_pls_golite062009 |
| chromatin binding | 1.40125726306854 | bayes_pls_golite062009 |
| DNA binding | 0.995851697740616 | bayes_pls_golite062009 |
| nucleic acid binding | 0.897498965407176 | bayes_pls_golite062009 |
| transcription factor activity | 0.642910879091782 | bayes_pls_golite062009 |
|
Region A: Residues: [116-525] |
1 11 21 31 41 51
| | | | | |
1 RGDFGAGLLD LHAMDDTELL SEHVITEPFE PSPFMPSVNK EFEEDYNLAA NRQQRQQTEA 60
61 EPLGLLPKSD KENNSVAKIK VVVRKRPLNK KETAKKEEDV VTVSDNSLTV HEPRVKVDLT 120
121 AYVEKHEFCF DAVLDEDVSN DEVYRATIEP IIPIIFQRTK ATCFAYGQTG SGKTFTMKPL 180
181 PIRAVEDLMR LLRQPVYSNQ RFKLWLSYFE IYGGKLFDLL SERKKLCMRE DGRQQVCIVG 240
241 LQEYEVSDVQ IVKDFIEKGN AERSTGSTGA NEESSRSHAI LQLVVKKHVE VKDTRRRNND 300
301 SNELPGKVVG KISFIDLAGS ERGADTTDND RQTRIEGAEI NKSLLALKEC IRALDNDQLH 360
361 IPFRGSKLTE VLRDSFVGNS RTVMISCISP NAGSCEHTLN TLRYADRVKS
|
| Detection Method: | |
| Confidence: | 72.221849 |
| Match: | 2gryA |
| Description: | No description for 2gryA was found. |
|
Region A: Residues: [526-794] |
1 11 21 31 41 51
| | | | | |
1 LSKSGNSKKD QTANSMPPVN KDPLLGPNDV EDVFEPPQEV NVPETRRRVV EKDSNSSTSG 60
61 IDFRQPTNYR EESGIPSFSM DKGRSEPNSS FAGSTSQRNN ISSYPQETSD REEKVKKVSP 120
121 PRGKGLREEK PDRPQNWSKR DVSSSDIPTL TNFRQNASET ASRQYETASR QYETDPSLDE 180
181 NLDALLEEEE ALIAAHRKEI EDTMEIVREE MKLLAEVDQP GSMIENYVTQ LSFVLSRKAA 240
241 GLVSLQARLA RFQHRLKEQE ILSRKRVPR
|
| Detection Method: | |
| Confidence: | 11.154902 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
