| Protein: | gi|18404909, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 515 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|18404909, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
352.0 | [0..1] | [282..586] |
|
Region A: Residues: [1-283] |
1 11 21 31 41 51
| | | | | |
1 MMTNSDSDHC TPAKTSISGD GLEKESDFKK QLNSEIDPQA SSSQNDAITM EDGAVSVNNR 60
61 DLQEIKESSF SKGSEQYRVD GALEESLNFE EKEQESEAQR LLEAEKRRLL AEIELGSIFR 120
121 KSVDVDTLPK IEETMDNDVD KIELVDHTAL VDVVHHPKRP GTAQNEKDTP RKLKKIGDKR 180
181 NVIEGSGVEN NGKQFRRLYT RKQLESMRFA HIVNQKNLWS EMYSRILPEV VTEYESLVYV 240
241 KNYKSSKSNR VRGRTESGNE ENLGTEEGTE DPEDYTDDND DYN
|
| Detection Method: |  |
| Confidence: | 1.09 |
| Match: | 2i1jA |
| Description: | No description for 2i1jA was found. |
|
Region A: Residues: [284-515] |
1 11 21 31 41 51
| | | | | |
1 SILRPAFEVD GEPDFSTGPP EDGLEYLRRV RWEAKGIPNV RVAKIDESTY IKKEQSVYMP 60
61 LIPEIPKCPE YLLPMKEWED SLLLDFVHLR QTLTQSANSC EDEIISSQCV EDLLVEMFNK 120
121 HLHTEEDESF GEVVTDIQGM DSVTRVSKLK KRICLVEKES GLQSSDCKWV VALCASLETP 180
181 LDADTCACLR GLLRKCASVR AETSLEVGDE EVITMANMLI TIAGRYFGQM GQ
|
| Detection Method: | |
| Confidence: | 1.09 |
| Match: | 1c8sA |
| Description: | Bacteriorhodopsin |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| signal transducer activity | 0.962876380535311 | bayes_pls_golite062009 |
| molecular transducer activity | 0.962876380535311 | bayes_pls_golite062009 |
| receptor activity | 0.869047926372052 | bayes_pls_golite062009 |
| transmembrane receptor activity | 0.523578064861943 | bayes_pls_golite062009 |
| G-protein coupled receptor activity | 0.389220516476528 | bayes_pls_golite062009 |
| binding | 0.0227247310453034 | bayes_pls_golite062009 |
