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View Structure Prediction Details

Protein: ISPH_ORYSJ
Organism: Oryza sativa Japonica Group
Length: 459 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ISPH_ORYSJ.

Description E-value Query
Range
Subject
Range
gi|10716963 - gi|10716963|gb|AAG21984.1|AF270978_1 LYTB-like protein precursor [Adonis palaestina]
599.0 [0..10] [459..14]

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Predicted Domain #1
Region A:
Residues: [1-112]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATITTQLRS ALLSPAASPS RRARRAPSSV RCDSSAASSL SASASLDADF DKKQFRHNLT  60
   61 RSDNYNRKGF GHKKETLELM SQEYTSDVIK TLKENGNQHT WGPVTVKLAE AY

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [113-186]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GFCWGVERAV QIAYEARKQF PDDRIWLTNE IIHNPTVNKR LEDMGVQNIP VDAGIKDFDV  60
   61 VEQGDVVVLP AFGA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [187-291]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AVEEMYTLNE KKVQIVDTTC PWVSKVWNMV EKHKKGDYTS IIHGKYSHEE TVATASFAGT  60
   61 YIIVKNIAEA SYVCDYILGG QLDGSSSTKE EFLEKFKNAV SPGFD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [292-459]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PDVDLVKVGI ANQTTMLKGE TEEIGKLVEK TMMRRFGVEN VNDHFIAFNT ICDATQERQD  60
   61 AMYQLVKEKV DLILVVGGWN SSNTSHLQEI GELSGIPSYW IDSEQRIGPG NKISYKLNHG 120
  121 ELVEKENWLP EGPITIGVTS GASTPDKVVE DALQKVFEIK RQEVLQAA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle