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View Structure Prediction Details

Protein: ISPH_ORYSJ
Organism: Oryza sativa Japonica Group
Length: 459 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ISPH_ORYSJ.

Description E-value Query
Range
Subject
Range
gi|10716963 - gi|10716963|gb|AAG21984.1|AF270978_1 LYTB-like protein precursor [Adonis palaestina]
599.0 [0..10] [459..14]

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Predicted Domain #1
Region A:
Residues: [1-112]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATITTQLRS ALLSPAASPS RRARRAPSSV RCDSSAASSL SASASLDADF DKKQFRHNLT  60
   61 RSDNYNRKGF GHKKETLELM SQEYTSDVIK TLKENGNQHT WGPVTVKLAE AY

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [113-186]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GFCWGVERAV QIAYEARKQF PDDRIWLTNE IIHNPTVNKR LEDMGVQNIP VDAGIKDFDV  60
   61 VEQGDVVVLP AFGA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [187-291]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AVEEMYTLNE KKVQIVDTTC PWVSKVWNMV EKHKKGDYTS IIHGKYSHEE TVATASFAGT  60
   61 YIIVKNIAEA SYVCDYILGG QLDGSSSTKE EFLEKFKNAV SPGFD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [292-459]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PDVDLVKVGI ANQTTMLKGE TEEIGKLVEK TMMRRFGVEN VNDHFIAFNT ICDATQERQD  60
   61 AMYQLVKEKV DLILVVGGWN SSNTSHLQEI GELSGIPSYW IDSEQRIGPG NKISYKLNHG 120
  121 ELVEKENWLP EGPITIGVTS GASTPDKVVE DALQKVFEIK RQEVLQAA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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