Protein: | DCP2_ARATH |
Organism: | Arabidopsis thaliana |
Length: | 373 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DCP2_ARATH.
Description | E-value | Query Range |
Subject Range |
|
326.0 | [0..1] | [373..1] |
|
296.0 | [0..23] | [368..12] |
|
295.0 | [0..23] | [368..12] |
|
295.0 | [0..23] | [368..12] |
|
294.0 | [0..23] | [368..12] |
|
278.0 | [0..23] | [368..85] |
Region A: Residues: [1-247] |
1 11 21 31 41 51 | | | | | | 1 MSGLHRSSSS SKNIGNCLPS KELLDDLCSR FVLNVPEEDQ QSFERILFLV EYAYWYYEDN 60 61 AVENDPKLKS LSLKEFTSLL FNSCDVLRPY VTHIDDIFKD FTSYKCRVPV TGAIILDETY 120 121 ERCLLVKGWK GSSWSFPRGK KSKDEEDHAC AIREVLEETG FDVSKLLKRE EYIEFVFRQQ 180 181 RVRLYIVAGV TEDTVFAPLT KKEISEITWH RLDHLQPASN EVITHGVSGL KLYMVAPFLS 240 241 SLKSWIL |
Detection Method: | |
Confidence: | 56.69897 |
Match: | 2a6tA |
Description: | Crystal structure of S.pombe mRNA decapping enzyme Dcp2p |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [248-373] |
1 11 21 31 41 51 | | | | | | 1 KHPSPVARRP NKPLKALCVW NARTSVGGNG TATVESQNRK SELRTTTMES NSRKPELKRT 60 61 TMESHSTKPE LRKGTMESHN TTATVESHNT KPVVDHSQDI KPGGSFINFK FNQSVILQAL 120 121 ESGNSA |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.