| Protein: | EER5_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 413 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for EER5_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
276.0 | [0..9] | [407..2] |
|
Region A: Residues: [1-323] |
1 11 21 31 41 51
| | | | | |
1 MAYVSMGEAH RRITEYLNRF CDAVSYQDSS TLCRLLSFSS NSPPLLSLAD ALNVFQDSSS 60
61 LIRQSDRFSE YGEILAHVFR SLQSYRVGNL VEAYLAFDKF ANAFVQEFRN WESAWALEAL 120
121 YVVCYEIRVL AEKADKDLTS NGKSPEKLKA AGSLLMKVFG VLAGKGPKRV GALYVTCQLF 180
181 KTYFKLGTVN LCRSVIRSIE TARIFDFEEF PRRDKVTYMY YTGRLEVFNE NFPAADTKLS 240
241 YALQNCNPKR ERNIRMILKY LVPVKLSLGI IPKDELLRNY NLHEYTKIVQ ALRKGDLRLL 300
301 RHALQEHEDR FLRSGVYLVL EKL
|
| Detection Method: |  |
| Confidence: | 1.09 |
| Match: | 1qqeA |
| Description: | Vesicular transport protein sec17 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.630110012421582 | bayes_pls_golite062009 |
| protein binding | 0.305336743191506 | bayes_pls_golite062009 |
|
Region A: Residues: [324-413] |
1 11 21 31 41 51
| | | | | |
1 ELQVYQRLMK KIYINQKLSD PARAHQLKLE GIAKALRWLD MDMDLDEVEC IMTILIYKNL 60
61 VKGYLAHKSK VVVLSKQDPF PKLNGKPVSS
|
| Detection Method: | |
| Confidence: | 10.69897 |
| Match: | 1ufmA |
| Description: | Solution structure of the PCI domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.51035161466585 | bayes_pls_golite062009 |
| nucleic acid binding | 1.23382025894466 | bayes_pls_golite062009 |
| transcription regulator activity | 1.1493668902455 | bayes_pls_golite062009 |
| DNA binding | 1.13187257937697 | bayes_pls_golite062009 |
| transcription factor activity | 0.33507444482415 | bayes_pls_golite062009 |
