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View Structure Prediction Details

Protein: gi|6179398, gi|2...
Organism: Arabidopsis thaliana
Length: 549 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|6179398, gi|2....

Description E-value Query
Range
Subject
Range
gi|20465921, gi|... - gi|9280290|dbj|BAB01745.1| BNH protein; pectinesterase-like protein; pollen-secific protein-like [Ar...
414.0 [0..3] [549..4]

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Predicted Domain #1
Region A:
Residues: [1-549]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGRLLTVLV CLVSTVAIVN AGDPYFFHTW NVTYGTASPL GVPQKVILIN GQFPGPNLNS  60
   61 TSNNNVVINV FNHLDEPFLL TWSGIQHRKN CWQDGVAGTS CPIPAGQNFT YHFQPKDQIG 120
  121 SYFYYPTTSL HRFAGGFGGL RVNSRLLIPV PYADPEDDYT VLLGDWYTAG HTALKNFLDS 180
  181 GRTLGLPNGV LINGKSGKVG GKNEPLFTMK PGKTYKYRLC NVGFKSTLNF RIQNHKMKLV 240
  241 EMEGSHVIQN DYDSLDVHVG QCFSVLVTAN QAAKDYYMVA STRFLKKELS TVGVIRYEGS 300
  301 NVQASTELPK APVGWAWSLN QFRSFRWNLT SNAARPNPQG SYHYGKINIT RSIKLVNSKS 360
  361 VVDGKVRFGF NGVSHVDTET PLKLAEYFQM SEKVFKYNVI KDEPAAKITA LTVQPNVLNI 420
  421 TFRTFVEIIF ENHEKTMQSF HLDGYSFFAV ASEPGRWTPE KRENYNLLDA VSRHTVQVYP 480
  481 KSWSAILLTF DNAGMWNIRS ENLERKYLGE QLYVSVLSPE KSLRDEYNIP LNTNLCGIVK 540
  541 GLPLPAHYS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 95.09691
Match: 1aozA
Description: Ascorbate oxidase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle