YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: LPAAT_ARATH
Organism: Arabidopsis thaliana
Length: 418 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LPAAT_ARATH.

Description E-value Query
Range
Subject
Range
gi|7269266, gi|5... - pir||T13464 hypothetical protein T19F6.150 - Arabidopsis thaliana, gi|7269266|emb|CAB79326.1| putati...
257.0 [0..12] [418..1]

Back

Predicted Domain #1
Region A:
Residues: [1-418]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLSRFASRL RMAEEISKTK VGSSSTASVA DSSAAASAAT NAAKSRWKIL WPNSLRWIPT  60
   61 STDYIIAAEK RLLSILKTPY VQEQVSIGSG PPGSKIRWFR STSNESRYIN TVTFDAKEGA 120
  121 PTLVMVHGYG ASQGFFFRNF DALASRFRVI AIDQLGWGGS SRPDFTCRST EETEAWFIDS 180
  181 FEEWRKAQNL SNFILLGHSF GGYVAAKYAL KHPEHVQHLI LVGSAGFSAE ADAKSEWLTK 240
  241 FRATWKGAVL NHLWESNFTP QKLVRGLGPW GPGLVNRYTT ARFGAHSEGT GLTEEEAKLL 300
  301 TDYVYHTLAA KASGELCLKY IFSFGAFARK PLLQSASEWK VPTTFIYGMN DWMNYQGAVE 360
  361 ARKSMKVPCE IIRVPQGGHF VFIDNPIGFH SAVLYACRKF ISQDSSHDQQ LLDGLRLV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 60.045757
Match: 1s8oA
Description: Human soluble Epoxide Hydrolase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.39629727416851 bayes_pls_golite062009
phospholipase activity 1.05835015160042 bayes_pls_golite062009
lipase activity 0.849473630399459 bayes_pls_golite062009
binding 0.780364496307855 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 0.541803897301601 bayes_pls_golite062009
carboxylesterase activity 0.424330502936163 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle