YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: FK161_ARATH
Organism: Arabidopsis thaliana
Length: 207 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FK161_ARATH.

Description E-value Query
Range
Subject
Range
gi|2231716 - gi|2231716|gb|AAC45691.1| macrophage infectivity potentiator [Legionella hackeliae]
172.0 [0..2] [206..72]

Back

Predicted Domain #1
Region A:
Residues: [1-207]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMAMEISLP FVGSSMALSA GKSRNSVSRI SRVGFSSVSA VHVPRRMFMQ LSGFGSVLTL  60
   61 LDFPSLAAPV PQMKEPEVIR TLKLPSGVRY QEIIEGEGRE AHEGDLVELN YVCRRANGYF 120
  121 VHSTVDQFSG ESSPVKLILD ENDVIEGLKE VLVGMKAGGK RRALIPPSVG YINETLKPIP 180
  181 EEFGPRRSLL SHANEPLVFE IQLLKVL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 41.522879
Match: 1fd9A
Description: Macrophage infectivity potentiator protein (MIP)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.355223926248969 bayes_pls_golite062009
isomerase activity 0.11136303327967 bayes_pls_golite062009
cis-trans isomerase activity 0.0710660189922594 bayes_pls_golite062009
peptidyl-prolyl cis-trans isomerase activity 0.0709473849313795 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle