Protein: | PS13B_ARATH |
Organism: | Arabidopsis thaliana |
Length: | 386 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PS13B_ARATH.
Description | E-value | Query Range |
Subject Range |
|
252.0 | [0..3] | [386..2] |
|
250.0 | [0..1] | [386..1] |
|
248.0 | [0..3] | [384..4] |
|
248.0 | [0..3] | [384..4] |
|
247.0 | [0..3] | [384..4] |
|
247.0 | [0..3] | [384..4] |
Region A: Residues: [1-188] |
1 11 21 31 41 51 | | | | | | 1 MAALQYLESQ KNAHPELGEW YNSLADLYQK KLWHQLTLKL EQFIALSVFQ AGDALIQLYN 60 61 NFITDFETRI NLLKLAHFAV VVSRQYPEKE AAVSYLEGVI EKLKATKESR INEPISYIET 120 121 QIALFKLEQG DQKECKKILD DGKSLLDSMT DIDPSVYANF FWVSSQYHKV RQEFSEFYKN 180 181 ALLYLAYT |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [189-292] |
1 11 21 31 41 51 | | | | | | 1 SVDSLSESFK LDLAFDLSLS ALLGENIYNF GELLAHPILK SLLGTNVEWL YHILQAFNHG 60 61 DLVQYQELCR VHNASLSAQP ALVENEKKLL EKINILCLIE IIFS |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
MCM Score |
SCOP Match |
SCOP Description | ||
View | Download | 0.883 | a.118.1 | ARM repeat |
View | Download | 0.829 | f.1.4 | Bcl-2 inhibitors of programmed cell death |
View | Download | 0.787 | a.152.1 | Antioxidant defence protein AhpD |
View | Download | 0.676 | a.1.1 | Globin-like |
View | Download | 0.647 | a.118.11 | Cytochrome c oxidase subunit E |
View | Download | 0.646 | a.118.11 | Cytochrome c oxidase subunit E |
View | Download | 0.622 | a.1.1 | Globin-like |
View | Download | 0.605 | a.7.6 | Ribosomal protein S20 |
View | Download | 0.540 | a.29.2 | Bromodomain |
View | Download | 0.515 | d.87.2 | CO dehydrogenase flavoprotein C-terminal domain-like |
View | Download | 0.481 | a.165.1 | Myosin phosphatase inhibitor 17kDa protein, CPI-17 |
View | Download | 0.435 | a.23.2 | Diol dehydratase, gamma subunit |
View | Download | 0.375 | d.87.2 | CO dehydrogenase flavoprotein C-terminal domain-like |
View | Download | 0.337 | d.52.7 | Ribosome-binding factor A, RbfA |
Region A: Residues: [293-386] |
1 11 21 31 41 51 | | | | | | 1 RPAEDRTIPL SVIAERTKLS IEDVEHLLMK SLSVHLIEGI LDQVNGTVYV SWAQPRVLGI 60 61 PQIKSLRDQL DSWVDKVHTT LLSVEAETPD LVAA |
Detection Method: | |
Confidence: | 9.522879 |
Match: | 1ufmA |
Description: | Solution structure of the PCI domain |
Matching Structure (courtesy of the PDB): |