| Protein: | DPA_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 292 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DPA_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
357.0 | [0..10] | [284..66] |
|
Region A: Residues: [1-134] |
1 11 21 31 41 51
| | | | | |
1 MSMEMELFVT PEKQRQHPSV SVEKTPVRRK LIVDDDSEIG SEKKGQSRTS GGGLRQFSVM 60
61 VCQKLEAKKI TTYKEVADEI ISDFATIKQN AEKPLNENEY NEKNIRRRVY DALNVFMALD 120
121 IIARDKKEIR WKGL
|
| Detection Method: |  |
| Confidence: | 32.69897 |
| Match: | 1cf7B |
| Description: | Cell cycle transcription factor DP-2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.835523092977445 | bayes_pls_golite062009 |
| transcription regulator activity | 0.4843036104266 | bayes_pls_golite062009 |
| nucleic acid binding | 0.37117756729668 | bayes_pls_golite062009 |
| DNA binding | 0.3118855114645 | bayes_pls_golite062009 |
|
Region A: Residues: [135-292] |
1 11 21 31 41 51
| | | | | |
1 PITCKKDVEE VKMDRNKVMS SVQKKAAFLK ELREKVSSLE SLMSRNQEMV VKTQGPAEGF 60
61 TLPFILLETN PHAVVEIEIS EDMQLVHLDF NSTPFSVHDD AYILKLMQEQ KQEQNRVSSS 120
121 SSTHHQSQHS SAHSSSSSCI ASGTSGPVCW NSGSIDTR
|
| Detection Method: | |
| Confidence: | 50.154902 |
| Match: | 2azeA |
| Description: | Structure of the Rb C-terminal domain bound to an E2F1-DP1 heterodimer |
Matching Structure (courtesy of the PDB): |
|
