| Protein: | UBCP_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 340 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for UBCP_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
218.0 | [0..24] | [333..3] |
|
Region A: Residues: [1-142] |
1 11 21 31 41 51
| | | | | |
1 MASSSSSPTP SAAAAVSPLT EEELTLTVKW NGKEYTVRIC ADDSVAELKR RICLLTTVLP 60
61 KRQKLLYPKI GNKLSDDSLL LSSISFKPSL KMTMIGTVED DIIVDQAESP EIVDDFELGK 120
121 EEAVDVKDKE VNKQKLRRRI DQ
|
| Detection Method: |  |
| Confidence: | 6.30103 |
| Match: | 1oqyA |
| Description: | Structure of the DNA repair protein hHR23a |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.0934358341245259 | bayes_pls_golite062009 |
| protein binding | 0.03789551947602 | bayes_pls_golite062009 |
|
Region A: Residues: [143-340] |
1 11 21 31 41 51
| | | | | |
1 YKINLRTPCR QGKKLLVLDI DYTLFDHRST AENPLQLMRP YLHEFLTAAY AEYDIMIWSA 60
61 TSMKWVELKM TELGVLNNPN YKVTALLDHL AMITVQSDTR GIFDCKPLGL IWALLPEFYN 120
121 PGNTIMFDDL RRNFVMNPQN GLTIKPFRKA HANRDTDQEL VKLTQYLLTI AELSDLSSLH 180
181 HSRWESFSQD NVKRRRQE
|
| Detection Method: | |
| Confidence: | 39.0 |
| Match: | 1ta0A |
| Description: | Three-dimensional structure of a RNA-polymerase II binding protein with associated ligand. |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 1.02290994020378 | bayes_pls_golite062009 |
| hydrolase activity | 0.71914501009647 | bayes_pls_golite062009 |
