YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|254738166
Organism:	Bacillus anthracis str. Western North America USA6153
Length:	529 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|254738166.

Description	E-value	Query Range	Subject Range
gi\|42783215, gi\|... - gi\|42783215\|ref\|NP_980462.1\| 5'-nucleotidase family protein [Bacillus cereus ATCC 10987], gi\|4273914...	0.0	[1..529]	[1..529]
gi\|47568159, gi\|... - gi\|47568159\|ref\|ZP_00238863.1\| 5'-nucleotidase [Bacillus cereus G9241], gi\|47555149\|gb\|EAL13496.1\| 5...	0.0	[1..529]	[1..529]
gi\|227005698, gi... - gi\|227816879\|ref\|YP_002816888.1\| 5'-nucleotidase family protein [Bacillus anthracis str. CDC 684], g... gi\|164713096, gi... - gi\|165871177\|ref\|ZP_02215827.1\| 5'-nucleotidase family protein [Bacillus anthracis str. A0488], gi\|1... gi\|229602324, gi... - gi\|229602324\|ref\|YP_002868401.1\| 5'-nucleotidase family protein [Bacillus anthracis str. A0248], gi\|... gi\|254683869 - gi\|254683869\|ref\|ZP_05147729.1\| 5'-nucleotidase family protein [Bacillus anthracis str. CNEVA-9066] gi\|167639554, gi... - gi\|167639554\|ref\|ZP_02397825.1\| 5'-nucleotidase family protein [Bacillus anthracis str. A0193], gi\|1... gi\|254721704 - gi\|254721704\|ref\|ZP_05183493.1\| 5'-nucleotidase family protein [Bacillus anthracis str. A1055] gi\|167531122, gi... - gi\|167633716\|ref\|ZP_02392040.1\| 5'-nucleotidase family protein [Bacillus anthracis str. A0442], gi\|1... gi\|254736216 - gi\|254736216\|ref\|ZP_05193922.1\| 5'-nucleotidase family protein [Bacillus anthracis str. Western Nort... gi\|47504768, gi\|... - gi\|47529620\|ref\|YP_020969.1\| 5'-nucleotidase family protein [Bacillus anthracis str. 'Ames Ancestor'... gi\|254744106 - gi\|254744106\|ref\|ZP_05201789.1\| 5'-nucleotidase family protein [Bacillus anthracis str. Kruger B] gi\|30264178, gi\|... - gi\|30264178\|ref\|NP_846555.1\| 5'-nucleotidase family protein [Bacillus anthracis str. Ames], gi\|30258... gi\|254754114 - gi\|254754114\|ref\|ZP_05206149.1\| 5'-nucleotidase family protein [Bacillus anthracis str. Vollum] gi\|65321493, gi\|... - gi\|65321493\|ref\|ZP_00394452.1\| COG0737: 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related e... gi\|254758195 - gi\|254758195\|ref\|ZP_05210222.1\| 5'-nucleotidase family protein [Bacillus anthracis str. Australia 94... gi\|49180934, gi\|... - gi\|49187007\|ref\|YP_030259.1\| 5'-nucleotidase family protein [Bacillus anthracis str. Sterne], gi\|491... gi\|170705674, gi... - gi\|170705674\|ref\|ZP_02896137.1\| 5'-nucleotidase family protein [Bacillus anthracis str. A0389], gi\|1... gi\|170687205, gi... - gi\|170687205\|ref\|ZP_02878423.1\| 5'-nucleotidase family protein [Bacillus anthracis str. A0465], gi\|1... gi\|190562699, gi... - gi\|190565780\|ref\|ZP_03018699.1\| 5'-nucleotidase family protein [Bacillus anthracis Tsiankovskii-I], ... gi\|177652690, gi... - gi\|177652690\|ref\|ZP_02935106.1\| 5'-nucleotidase family protein [Bacillus anthracis str. A0174], gi\|1...	0.0	[1..529]	[1..529]
gi\|228929151, gi... - gi\|228929151\|ref\|ZP_04092178.1\| 5'-Nucleotidase domain protein [Bacillus thuringiensis serovar pondi... gi\|228842928, gi... - gi\|228916741\|ref\|ZP_04080306.1\| 5'-Nucleotidase domain protein [Bacillus thuringiensis serovar pulsi... gi\|49331888, gi\|... - gi\|49480332\|ref\|YP_038161.1\| 5'-nucleotidase [Bacillus thuringiensis serovar konkukian str. 97-27], ... gi\|225789552, gi... - gi\|225866086\|ref\|YP_002751464.1\| 5'-nucleotidase family protein [Bacillus cereus 03BB102], gi\|225789... gi\|228597141, gi... - gi\|229186347\|ref\|ZP_04313512.1\| 5'-Nucleotidase domain protein [Bacillus cereus BGSC 6E1], gi\|228597... gi\|228659759, gi... - gi\|229123624\|ref\|ZP_04252819.1\| 5'-Nucleotidase domain protein [Bacillus cereus 95/8201], gi\|2286597... gi\|228690137, gi... - gi\|229093163\|ref\|ZP_04224281.1\| 5'-Nucleotidase domain protein [Bacillus cereus Rock3-42], gi\|228690... gi\|218905240, gi... - gi\|218905240\|ref\|YP_002453074.1\| 5'-nucleotidase family protein [Bacillus cereus AH820], gi\|21853626... gi\|228935423, gi... - gi\|228935423\|ref\|ZP_04098241.1\| 5'-Nucleotidase domain protein [Bacillus thuringiensis serovar andal... gi\|196021945, gi... - gi\|196047196\|ref\|ZP_03114412.1\| 5'-nucleotidase family protein [Bacillus cereus 03BB108], gi\|1960219... gi\|195992538, gi... - gi\|196034999\|ref\|ZP_03102406.1\| 5'-nucleotidase family protein [Bacillus cereus W], gi\|195992538\|gb\|... gi\|118479302, gi... - gi\|118479302\|ref\|YP_896453.1\| 5'-nucleotidase [Bacillus thuringiensis str. Al Hakam], gi\|118418527\|g...	0.0	[1..529]	[1..529]
gi\|52141394, gi\|... - gi\|52141394\|ref\|YP_085436.1\| 5'-nucleotidase [Bacillus cereus E33L], gi\|51974863\|gb\|AAU16413.1\| 5'-n...	0.0	[1..529]	[1..529]
gi\|29897744, gi\|... - gi\|30022187\|ref\|NP_833818.1\| 5'-nucleotidase [Bacillus cereus ATCC 14579], gi\|29897744\|gb\|AAP11019.1... gi\|228631265, gi... - gi\|229152303\|ref\|ZP_04280496.1\| 5'-Nucleotidase domain protein [Bacillus cereus m1550], gi\|228631265... gi\|228653986, gi... - gi\|229129381\|ref\|ZP_04258352.1\| 5'-Nucleotidase domain protein [Bacillus cereus BDRD-Cer4], gi\|22865... gi\|218162341, gi... - gi\|218234384\|ref\|YP_002368905.1\| 5'-nucleotidase family protein [Bacillus cereus B4264], gi\|21816234...	0.0	[1..529]	[1..529]
gi\|163864040, gi... - gi\|89207364\|ref\|ZP_01185907.1\| Metallophosphoesterase:5'-Nucleotidase, C-terminal [Bacillus weihenst...	0.0	[1..529]	[1..529]
gi\|152025262, gi... - gi\|89200745\|ref\|ZP_01179495.1\| Metallophosphoesterase:5'-Nucleotidase, C-terminal [Bacillus cereus s...	0.0	[1..529]	[2..530]

Back

Predicted Domain #1

Region A:
Residues: [1-529]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKKIIPVAL ALSTVIFTSV FAVPSAQAST EPNRYIDVQM LGINDFHGQL DTVKKINNKD  60
   61 AGGIEYLGAY LRDREKQNPN TLKVHAGDVV GASTPVSALL QDEPTIEFLN DLKFDVGTIG 120
  121 NHEFDEGVEE MNRLIYGGYH EKTGKFKGAK FPYVAANFYN KSTGRLFLPP FTIKKVQGVP 180
  181 VGFIGVVTTD VPNLVMPTML KNVEITDEVE AINKSVKQLK KLGVKSIVVL AHNGGTTDGN 240
  241 GVTNGDIVRL ANETDPEVDV IFGGHSHTYV NGTVNNKLVV QANSYGMAFA DVDVKIDRKT 300
  301 QDIVEKKAEI VTTYHEGMEP DKKIKKKMEK YQAKIAPLVN EVVGKSIAPL DRKLNTAGES 360
  361 TLGNLVADAQ RATMQSQIAL MNPGGIRNDL DAGDITWGEI YGIQPFGNQL IKVNLTGQDI 420
  421 RDILNQQWQK DITRMLQISG IQYTWDANKP NGEKVTSIRL TNGEEIIPSK TYSVVANAFL 480
  481 ASGGDGFVSF KNGKDAETGP TDFEALVDYI KKSKEPIQSI IDGRIQKIN

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	111.0
Match:	1ushA
Description:	5'-NUCLEOTIDASE FROM E. COLI
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
phosphoprotein phosphatase activity	6.90309911517124	bayes_pls_golite062009
phosphoric ester hydrolase activity	6.76617976580319	bayes_pls_golite062009
phosphatase activity	6.28072946025083	bayes_pls_golite062009
hydrolase activity, acting on ester bonds	5.93537144836081	bayes_pls_golite062009
protein serine/threonine phosphatase activity	5.11265802430394	bayes_pls_golite062009
hydrolase activity	2.06280293513737	bayes_pls_golite062009
catalytic activity	1.39852585255405	bayes_pls_golite062009
binding	0.607014751804583	bayes_pls_golite062009
calcium-dependent protein serine/threonine phosphatase activity	0.598330833036731	bayes_pls_golite062009
protein kinase activity	0.55395641922978	bayes_pls_golite062009
signal transducer activity	0.541715460439478	bayes_pls_golite062009
molecular transducer activity	0.541715460439478	bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor	0.395006104431866	bayes_pls_golite062009
kinase activity	0.366390322110727	bayes_pls_golite062009
protein binding	0.184079020957384	bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups	2.39246790349923E-4	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: