YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|254683066
Organism:	Bacillus anthracis str. CNEVA-9066
Length:	339 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|254683066.

Description	E-value	Query Range	Subject Range
gi\|75763814, gi\|... - gi\|75763814\|ref\|ZP_00743470.1\| Molybdopterin biosynthesis MoeB protein [Bacillus thuringiensis serov...	0.0	[1..339]	[1..339]
gi\|218232275, gi... - gi\|218232275\|ref\|YP_002365527.1\| hesA/moeB/thiF family protein [Bacillus cereus B4264], gi\|218160232... gi\|30018909, gi\|... - gi\|30018909\|ref\|NP_830540.1\| thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein [Bacillus ce...	0.0	[1..339]	[1..339]
gi\|42779880, gi\|... - gi\|42779880\|ref\|NP_977127.1\| thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein [Bacillus ce...	0.0	[1..339]	[1..339]
gi\|47564665, gi\|... - gi\|47564665\|ref\|ZP_00235709.1\| moeB [Bacillus cereus G9241], gi\|47558038\|gb\|EAL16362.1\| moeB [Bacill...	0.0	[1..339]	[1..339]
gi\|196022399, gi... - gi\|196046687\|ref\|ZP_03113910.1\| hesA/moeB/thiF family protein [Bacillus cereus 03BB108], gi\|19602239... gi\|49331833, gi\|... - gi\|49480277\|ref\|YP_034988.1\| thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein [Bacillus th... gi\|52144580, gi\|... - gi\|52144580\|ref\|YP_082248.1\| thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein [Bacillus ce... gi\|118476408, gi... - gi\|118476408\|ref\|YP_893559.1\| thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein [Bacillus t...	0.0	[1..339]	[1..339]
gi\|65318159, gi\|... - gi\|65318159\|ref\|ZP_00391118.1\| COG0476: Dinucleotide-utilizing enzymes involved in molybdopterin and...	0.0	[1..339]	[1..339]
gi\|163938655, gi... - gi\|89207099\|ref\|ZP_01185647.1\| MoeZ/MoeB [Bacillus weihenstephanensis KBAB4], gi\|89155001\|gb\|EAR7502...	0.0	[1..339]	[1..339]
gi\|89148737, gi\|... - gi\|89203236\|ref\|ZP_01181924.1\| MoeZ/MoeB [Bacillus cereus subsp. cytotoxis NVH 391-98], gi\|89148737\|...	0.0	[1..339]	[1..339]
gi\|52141968, gi\|... - gi\|52141968\|ref\|YP_084861.1\| thiamine/molybdopterin biosynthesis MoeB-like protein [Bacillus cereus ...	9.0E-96	[1..339]	[1..338]

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Predicted Domain #1

Region A:
Residues: [1-243]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNNRYSRQEL FSPIGEEGQQ KIRKKHVLII GAGALGSANA EMFVRAGVGT VTIVDRDYVD  60
   61 WSNLQRQQLY VESDVENNLP KAVAAKKRLE EINSEVRVKA LVQDVTAEEL EELVTNVNVM 120
  121 IDATDNFETR FIVNDIAQKY SIPWIYGACV GSYGLSYTIL PSKTPCLSCL LQSIPLGGAT 180
  181 CDTAGIISPA VSLVVSHQVT EALKLLVEDY ESLRDGLVSF DVWKNEYSCM NVQKLRKHNC 240
  241 PSC

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	70.0
Match:	1jw9B
Description:	Molybdenum cofactor biosynthesis protein MoeB
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
small protein activating enzyme activity	1.61603220653307	bayes_pls_golite062009
catalytic activity	1.59245438598251	bayes_pls_golite062009
URM1 activating enzyme activity	0.936791644743361	bayes_pls_golite062009

Predicted Domain #2

Region A:
Residues: [244-339]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GENALYPYLN KENTSKTAVL CGRNTVQIRP PYKEEMDFER YKELLNDRVN DLNVNPYLLS  60
   61 FSVEEKRLVA FKDGRVLVHG TKDISEAKTV YHRYFG

[Run NCBI BLAST on this sequence.]

Detection Method:	FFAS03
Confidence:	0.978
Match:	1mp9A
Description:	TBP from a mesothermophilic archaeon, Sulfolobus acidocaldarius
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
transcription regulator activity	0.778578922921599	bayes_pls_golite062009
nucleic acid binding	0.264534122593755	bayes_pls_golite062009
DNA binding	0.222880428557847	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions:

Predicted functions: