| Protein: | gi|50355737, gi|... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 417 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|50355737, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
389.0 | [0..1] | [417..1] |
|
Region A: Residues: [1-116] |
1 11 21 31 41 51
| | | | | |
1 MFGRAPKKSD NTRYYEVLGV PKDASQDDLK KAYRKAAIKN HPDKGGDPEK FKELAQAYEV 60
61 LSDPEKREIY DQYGEDALKE GMGPGGGMHD PFDIFSSFFG GGFGGGSSRG RRQRRG
|
| Detection Method: |  |
| Confidence: | 20.0 |
| Match: | 1bq0A |
| Description: | J-DOMAIN (RESIDUES 1-77) OF THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 1-104) OF THE MOLECULAR CHAPERONE DNAJ, NMR, 20 STRUCTURES |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| unfolded protein binding | 3.04403163860617 | bayes_pls_golite062009 |
| chaperone binding | 2.86745334638583 | bayes_pls_golite062009 |
| protein binding | 2.65982681685488 | bayes_pls_golite062009 |
| binding | 2.63138872417193 | bayes_pls_golite062009 |
| heat shock protein binding | 2.17994194200939 | bayes_pls_golite062009 |
| transcription regulator activity | 1.91297632253219 | bayes_pls_golite062009 |
| nucleic acid binding | 1.6342534817623 | bayes_pls_golite062009 |
| DNA binding | 1.55234338199368 | bayes_pls_golite062009 |
| Hsp70 protein binding | 0.541755903922701 | bayes_pls_golite062009 |
| transferase activity | 0.240656521918556 | bayes_pls_golite062009 |
| catalytic activity | 0.106988907594358 | bayes_pls_golite062009 |
| receptor binding | 0.0658139321670459 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 0.0276971914937192 | bayes_pls_golite062009 |
|
Region A: Residues: [117-417] |
1 11 21 31 41 51
| | | | | |
1 EDVVHPLKVS LEELYNGTSK KLSLSRNVLC SKCNGKGSKS GASMKCSGCQ GSGMKVQIRQ 60
61 LGPGMIQQMQ HPCNECKGTG ETISDKDRCP GCKGEKVAQE KKVLEVVVEK GMQNGQKITF 120
121 PGEADEAPDT VTGDIIFVLQ QKEHPKFKRK GDDLFYEHTL NLTEALCGFQ FVLTHLDNRQ 180
181 LLIKSKPGEV VKPDSFKAVN DEGMPMYQRP FMKGKLYIHF SVEFPDSLNP DQCKALETVL 240
241 PPRPVSQYTD MELDECEETM PYDVNIEEEM RRRQQQQQQE AYDEDEDMHG GGAQRVQCAQ 300
301 Q
|
| Detection Method: | |
| Confidence: | 49.0 |
| Match: | 1nltA |
| Description: | The crystal structure of Hsp40 Ydj1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.7298921704023 | bayes_pls_golite062009 |
| protein binding | 2.6297172985864 | bayes_pls_golite062009 |
| protein disulfide isomerase activity | 2.4409950647303 | bayes_pls_golite062009 |
| intramolecular oxidoreductase activity, transposing S-S bonds | 2.4409950647303 | bayes_pls_golite062009 |
| intramolecular oxidoreductase activity, interconverting keto- and enol-groups | 2.23398279564144 | bayes_pls_golite062009 |
| unfolded protein binding | 2.04158808514315 | bayes_pls_golite062009 |
| receptor binding | 1.01508461105961 | bayes_pls_golite062009 |
| catalytic activity | 0.276917867171685 | bayes_pls_golite062009 |
