| Protein: | gi|108711444, gi... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 1259 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|108711444, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
786.0 | [0..2] | [1246..22] |
|
|
781.0 | [0..2] | [1246..22] |
|
|
776.0 | [0..1] | [1258..22] |
|
|
776.0 | [0..2] | [1246..39] |
|
|
774.0 | [0..1] | [917..1] |
|
|
773.0 | [0..2] | [1246..22] |
|
|
772.0 | [0..2] | [1246..22] |
|
Region A: Residues: [1-165] |
1 11 21 31 41 51
| | | | | |
1 MVLTTPLAEA ACRKSGLSVV DMLSPFSLFK KIDVPVRTAS DQPYRLQMFK IRMVYASDVR 60
61 KQDYEVADQR IKPVVSEANE SALPDLLSDP PQLEDVLSKP EAELCPLWIK KFNRALMRTL 120
121 SFSEHETFDH PVACLLVVSS KDNEPISKFV DLFNTNQLPS LLNEG
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [166-303] |
1 11 21 31 41 51
| | | | | |
1 IMDPQILKHY LILHDQQDGP QEIAMNILAE MKSTLGLNDC KLLCINSSTE ADGADAENSW 60
61 LPYKSHGLHN QDGACWLNTD DLNEIKDFMQ DLASNHIIPY MEQKIRVLNQ QVATTRKGFR 120
121 NQIKNLWWRK RDDVPEAA
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [304-619] |
1 11 21 31 41 51
| | | | | |
1 NGPMYTFTSI ESQIRVLGDY AFMLRDYELA LSNYRLLSTD YKLDKAWKRF AGVQEMSGLC 60
61 YFMLDQSRKD AEYCLDSAFS TYLRIGSSGK RNATRCGIWW AEMLKTRGQY REASSVYYRV 120
121 SNEEPSLHSA VLLEQAACCY VLSKPPMLRK YGFHLVLAGN SYYISDQKQH AVRAYRNALF 180
181 VYKQHPWSYI NDHVHFNVGR WYGVLGIFDV AIKHLLEVIA CSHQSLTTQS MFLNDFFHFV 240
241 QSMGKKFDVY KLQLPVINMP SLRVIYEDHR TYASDADVNV SESIWQELEE EMIPSSSIVR 300
301 TNWLEKSPDL RKYKDS
|
| Detection Method: | |
| Confidence: | 5.522879 |
| Match: | 1w3bA |
| Description: | The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha. |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [620-695] |
1 11 21 31 41 51
| | | | | |
1 CVCVVGEAVK VRIELRNPLQ IPVVVSCISL ICQLSTSLDA SSAVNSVLTT GAGEDIANTK 60
61 PAISTFEDDG NNFTVS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [696-866] |
1 11 21 31 41 51
| | | | | |
1 KLDIVLGGSE TKSVQLEVTP KVEGILKLHG IRWTLSDLLV GYQYFEFDTK RKTKKGKKGP 60
61 RRTLSNTLIV IKGLPKLTGC IDHLPTNAFA GDLRLLKLNL RNQSEYAVKN IKMKLSHPRF 120
121 VIPGDLSEVD FEFPQCLRKH VQSEISTVST KRTQGDAKGL LFTFSQDIKI Q
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [867-1034] |
1 11 21 31 41 51
| | | | | |
1 EGATFSWPIW FHAATPGNFS LYISLYYEME SPSEITYRTL RMHYNIEVFP SLNVSFAIRM 60
61 CSSRLKEYIV RMDILNRTPS ESFILHQLSC NDSKWAISSL PLCDSIRSIE TVSANQSVSC 120
121 FFKIKDLGTN SCKEAENSSC RSDMLFLSRE GNSNTEEFDV SQSPITNF
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1035-1259] |
1 11 21 31 41 51
| | | | | |
1 HYQERYQQGR LAKGPRDLLD FILISKAVGG NYSKSDPDVQ LLSHHVCHCS AIDQSPIWWF 60
61 MEGPRTVTHD FSKSYCEANI QLVIHNTVQH NISARVVTYD SVPDKSQTVN LQDSNSNQGG 120
121 WYDVSLENDI KAISTAKGTH YQKQPSESIS PFVWCSLSSA QVDLKPDTST KVPLKVCIFM 180
181 PGTYNLSNYQ LQWKVHSSEV GQVDENQRSG GGQGHPFYVT VLQDA
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
