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View Structure Prediction Details

Protein: TAL_BDEBA
Organism: Bdellovibrio bacteriovorus
Length: 215 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TAL_BDEBA.

Description E-value Query
Range
Subject
Range
TAL_AQUAE - Probable transaldolase OS=Aquifex aeolicus (strain VF5) GN=tal PE=3 SV=1
TAL_AQUAE - Probable transaldolase OS=Aquifex aeolicus GN=tal PE=3 SV=1
314.0 [0..1] [215..1]

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Predicted Domain #1
Region A:
Residues: [1-215]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFFIDTAEI EEIRQANLRG WVDGVTTNPS LIAKSGKDFH TVIKEICKEI TGPVSAEVIS  60
   61 LQHEEMVREG KELAKLASNV VVKIPMCEDG MIAVKKLKSE GIKTNVTLVF SPMQALLAAK 120
  121 AGATMVSPFV GRLDDIGVEG MQMVDQVIQM YRNYDFETEV LVASVRSPMH IQLAAEMGAD 180
  181 IATIPFKVMQ SMTHHPLTDK GIKMFMDDWN KAQKK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 83.69897
Match: 1vpxA
Description: Crystal structure of Transaldolase (EC 2.2.1.2) (TM0295) from Thermotoga maritima at 2.40 A resolution
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
transferase activity, transferring aldehyde or ketonic groups 3.28746773527289 bayes_pls_golite062009
transaldolase activity 2.77878684721788 bayes_pls_golite062009
catalytic activity 2.67031204377352 bayes_pls_golite062009
fructose-bisphosphate aldolase activity 1.41110985630781 bayes_pls_golite062009
porphobilinogen synthase activity 0.658378297259497 bayes_pls_golite062009
fructose binding 0.427637212154492 bayes_pls_golite062009
aldehyde-lyase activity 0.351872954170322 bayes_pls_golite062009
transferase activity, transferring alkyl or aryl (other than methyl) groups 0.0319140634878892 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle