| Protein: | SPL10_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 396 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPL10_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
530.0 | [0..1] | [396..1] |
|
|
347.0 | [0..1] | [387..6] |
|
|
309.0 | [0..11] | [374..38] |
|
Region A: Residues: [1-159] |
1 11 21 31 41 51
| | | | | |
1 MDCNMVSSFP WDWENLIMSN QSKTENEKKQ QSTEWEFEKG EGIESIVPDF LGFEKVSSGS 60
61 ATSFWHTAVS KSSQSTSINS SSPEDKRCNL ASQSSPGDSS SNIDFLQVKP STALEVPIAS 120
121 AESDLCLKLG KRTYSEEFWG RNNNDLSAVS MNLLTPSVV
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [160-261] |
1 11 21 31 41 51
| | | | | |
1 ARKKTKSCGQ SMQVPRCQID GCELDLSSSK DYHRKHRVCE THSKCPKVVV SGLERRFCQQ 60
61 CSRFHAVSEF DEKKRSCRKR LSHHNARRRK PQGVFPLNSE RV
|
| Detection Method: | |
| Confidence: | 38.221849 |
| Match: | 1ul4A |
| Description: | Solution structure of the DNA-binding domain of squamosa promoter binding protein-like 4 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [262-396] |
1 11 21 31 41 51
| | | | | |
1 FDRRQHTSML WNGLSLNTRS EEKYTWGTTY ETKPTQMESG FTLSFQRGNG SEDQLFTGST 60
61 LSFSAFQTSG GFSAGKSNIQ LPDKGVGECS GGLHESHDFY SALSLLSTTS DSQGIKHTPV 120
121 AEPPPIFGTF PSHFI
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.258 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
