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Protein Overview: SPL10_ARATH

General Information:
Name(s) found: SPL10_ARATH [Swiss-Prot]
Description(s) found:
Found 19 descriptions.
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  • Squamosa promoter-binding-like protein 10 OS=Arabidopsis thaliana GN=SPL10 PE=2 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 396 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA][ISS]
    Biological Process: regulation of timing of transition from vegetative to reproductive phase [IMP]
    leaf shaping [IMP]
    regulation of transcription [TAS]
    Molecular Function: DNA binding [ISS]
    transcription factor activity [ISS]
    transcription activator activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDCNMVSSFP WDWENLIMSN QSKTENEKKQ QSTEWEFEKG EGIESIVPDF LGFEKVSSGS  60
   61 ATSFWHTAVS KSSQSTSINS SSPEDKRCNL ASQSSPGDSS SNIDFLQVKP STALEVPIAS 120
  121 AESDLCLKLG KRTYSEEFWG RNNNDLSAVS MNLLTPSVVA RKKTKSCGQS MQVPRCQIDG 180
  181 CELDLSSSKD YHRKHRVCET HSKCPKVVVS GLERRFCQQC SRFHAVSEFD EKKRSCRKRL 240
  241 SHHNARRRKP QGVFPLNSER VFDRRQHTSM LWNGLSLNTR SEEKYTWGTT YETKPTQMES 300
  301 GFTLSFQRGN GSEDQLFTGS TLSFSAFQTS GGFSAGKSNI QLPDKGVGEC SGGLHESHDF 360
  361 YSALSLLSTT SDSQGIKHTP VAEPPPIFGT FPSHFI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..159] deduced N/A No confident structure predictions are available.
    2 View Details [160..261] PSI-BLAST 38.221849 Solution structure of the DNA-binding domain of squamosa promoter binding protein-like 4
    3 View Details [262..396] MSA 1.043984 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle