| Protein: | VCL1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 858 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for VCL1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
1067.0 | [0..7] | [833..5] |
|
Region A: Residues: [1-85] |
1 11 21 31 41 51
| | | | | |
1 MANVSVAAEW QLLYDRYYRK PEIYQMKWKH VDLSRNKVAC ASFGGPIAVI RDDSKIVQLY 60
61 AESALRKLRI FNSAGILLSE TVWKH
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [86-174] |
1 11 21 31 41 51
| | | | | |
1 PGGRLIGMSW SDDQTLICIV QDGTIYRYNI HAELIEPNMS MGQECFEQNV VECVFWGNGV 60
61 VCLTEGGQLI CIFDFKTMKP SKLPDVPGL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [175-358] |
1 11 21 31 41 51
| | | | | |
1 AEDDLLQPIC LTVREPKYTM SGIAEVLVAV GDDIFVVEED MVQTIRFDEP SVDDSEMQND 60
61 DSGNLIGVVQ KMIVSPNGKF LTLFTHDGRI VVVDMETKQI AIDYSCESAL PPQQMAWCGM 120
121 DSVLLYWDED LMMVGPVGDP VHYFYDEPII LIPECDGVRI LSNTNLEFLQ RVPDSTESIF 180
181 KIGS
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [359-474] |
1 11 21 31 41 51
| | | | | |
1 TSPAALLYDA LDHFDRRSAK ADENLRLIRS SLSEAVESCI DAAGHEFDVT RQRALLRAAS 60
61 YGQAFCSNFQ RERVQETCRT LRVLNAVRDP AIGIPLSIQQ YKLLTPVVLI SRLINA
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [475-504] |
1 11 21 31 41 51
| | | | | |
1 NCHLLALRIS EYLDMNKEVV IMHWACAKIT
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [505-622] |
1 11 21 31 41 51
| | | | | |
1 ASPSTPDSHL LEILLDKLQL CKGISYAAVA THADNCGRRK LAAMLVEHEP RSTKQVPLLL 60
61 SIGEEDTALV KATESGDTDL VYLVIFHIWQ KRPPLEFFAM IQGRVLARDL FVAYARCH
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [623-709] |
1 11 21 31 41 51
| | | | | |
1 KHEFLKDFFL STGQIHEVAF LLWKESWDMG KNPMASKGSP LHGPRIKLIE KARNLFSQTK 60
61 EHTFESKAAE EHAKLLKIQH ELEASTK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [710-858] |
1 11 21 31 41 51
| | | | | |
1 QAIFVDSSIN DTIRTCIVLG NNRAAIKVKT EFKVSDKRWY WLKAFALATI KDWAALEKFS 60
61 KEKRPPMGFR PFVEACIDAD EKAEALKYIP KLSDLVERGE AYARIGMAKE AADCAAQAND 120
121 GGELLERFRK TFVQNAIFDT LLMPFQGAS
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
