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View Structure Prediction Details

Protein: MCAC1_ARATH
Organism: Arabidopsis thaliana
Length: 421 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MCAC1_ARATH.

Description E-value Query
Range
Subject
Range
gi|113547484, gi... - gi|115450825|ref|NP_001049013.1| Os03g0157300 [Oryza sativa (japonica cultivar-group)], gi|113547484...
gi|218192120 - gi|218192120|gb|EEC74547.1| hypothetical protein OsI_10083 [Oryza sativa Indica Group]
363.0 [0..3] [421..2]
gi|7270544, gi|3... - pir||T04702 hypothetical protein F4B14.190 - Arabidopsis thaliana, gi|7270544|emb|CAB81501.1| putati...
363.0 [0..1] [421..1]

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Predicted Domain #1
Region A:
Residues: [1-145]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSHSWDGLGE IASVAQLTGL DAVKLIGLIV KAANTAWMHK KNCRQFAQHL KLIGNLLEQL  60
   61 KISEMKKYPE TREPLEGLED ALRRSYLLVN SCRDRSYLYL LAMGWNIVYQ FRKHQDEIDR 120
  121 FLKIIPLITL VDNARIRERF EYIDR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.934 N/A N/A a.24.18 Description not found.

Predicted Domain #2
Region A:
Residues: [146-258]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DQREYTLDEE DRHVQDVILK QESTREAASV LKKTLSCSYP NLRFCEALKT ENEKLQIELQ  60
   61 RSQEHYDVAQ CEVIQRLIGV TQAAAAVEPD SEKELTKKAS KKSERSSSMK TEY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 10.39794
Match: 2nruA
Description: No description for 2nruA was found.

Predicted Domain #3
Region A:
Residues: [259-421]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SYDEDSPKKS STRAASRSTS NVSSGHDLLS RRASQAQHHE EWHTDLLACC SEPSLCFKTF  60
   61 FFPCGTLAKI ATAASNRHIS SAEACNELMA YSLILSCCCY TCCVRRKLRK TLNITGGFID 120
  121 DFLSHVMCCC CALVQELREV EIRGAYGTEK TKISPPSSQF MEH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle