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View Structure Prediction Details

Protein: MCAC1_ARATH
Organism: Arabidopsis thaliana
Length: 421 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MCAC1_ARATH.

Description E-value Query
Range
Subject
Range
gi|113547484, gi... - gi|115450825|ref|NP_001049013.1| Os03g0157300 [Oryza sativa (japonica cultivar-group)], gi|113547484...
gi|218192120 - gi|218192120|gb|EEC74547.1| hypothetical protein OsI_10083 [Oryza sativa Indica Group]
363.0 [0..3] [421..2]
gi|7270544, gi|3... - pir||T04702 hypothetical protein F4B14.190 - Arabidopsis thaliana, gi|7270544|emb|CAB81501.1| putati...
363.0 [0..1] [421..1]

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Predicted Domain #1
Region A:
Residues: [1-145]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSHSWDGLGE IASVAQLTGL DAVKLIGLIV KAANTAWMHK KNCRQFAQHL KLIGNLLEQL  60
   61 KISEMKKYPE TREPLEGLED ALRRSYLLVN SCRDRSYLYL LAMGWNIVYQ FRKHQDEIDR 120
  121 FLKIIPLITL VDNARIRERF EYIDR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.934 N/A N/A a.24.18 Description not found.
View Download 0.888 N/A N/A a.24.4 Hemerythrin
View Download 0.834 N/A N/A a.24.9 alpha-catenin/vinculin
View Download 0.809 N/A N/A a.13.1 alpha-2-Macroglobulin receptor associated protein (RAP) domain 1
View Download 0.794 N/A N/A a.7.3 Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
View Download 0.794 N/A N/A a.7.3 Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain
View Download 0.785 N/A N/A f.36.1 Neurotransmitter-gated ion-channel pransmembrane pore
View Download 0.782 N/A N/A d.79.2 Tubulin/Dihydroxyacetone kinase C-terminal domain
View Download 0.705 N/A N/A f.32.1 a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)
View Download 0.481 N/A N/A a.24.23 Description not found.
View Download 0.422 N/A N/A a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.290 N/A N/A a.74.1 Cyclin-like
View Download 0.282 N/A N/A a.159.3 Description not found.
View Download 0.269 N/A N/A a.16.1 S15/NS1 RNA-binding domain

Predicted Domain #2
Region A:
Residues: [146-258]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DQREYTLDEE DRHVQDVILK QESTREAASV LKKTLSCSYP NLRFCEALKT ENEKLQIELQ  60
   61 RSQEHYDVAQ CEVIQRLIGV TQAAAAVEPD SEKELTKKAS KKSERSSSMK TEY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 10.39794
Match: 2nruA
Description: No description for 2nruA was found.

Predicted Domain #3
Region A:
Residues: [259-421]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SYDEDSPKKS STRAASRSTS NVSSGHDLLS RRASQAQHHE EWHTDLLACC SEPSLCFKTF  60
   61 FFPCGTLAKI ATAASNRHIS SAEACNELMA YSLILSCCCY TCCVRRKLRK TLNITGGFID 120
  121 DFLSHVMCCC CALVQELREV EIRGAYGTEK TKISPPSSQF MEH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle