YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|229198219, gi...
Organism:	Bacillus cereus m1293
Length:	179 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|229198219, gi....

Description	E-value	Query Range	Subject Range
gi\|228614687, gi... - gi\|229168839\|ref\|ZP_04296558.1\| ADP-ribose pyrophosphatase [Bacillus cereus AH621], gi\|228614687\|gb\|... gi\|228648579, gi... - gi\|229134904\|ref\|ZP_04263711.1\| ADP-ribose pyrophosphatase [Bacillus cereus BDRD-ST196], gi\|22864857... gi\|89207370, gi\|... - gi\|89207370\|ref\|ZP_01185913.1\| NUDIX hydrolase [Bacillus weihenstephanensis KBAB4], gi\|89154728\|gb\|E...	2.0E-41	[1..179]	[1..179]
gi\|74489537, gi\|... - gi\|75762975\|ref\|ZP_00742773.1\| ADP-ribose pyrophosphatase [Bacillus thuringiensis serovar israelensi... gi\|218899257, gi... - gi\|218899257\|ref\|YP_002447668.1\| mutT/nudix family protein [Bacillus cereus G9842], gi\|218541079\|gb\|... gi\|228902606, gi... - gi\|228902606\|ref\|ZP_04066757.1\| ADP-ribose pyrophosphatase [Bacillus thuringiensis IBL 4222], gi\|228... gi\|228849761, gi... - gi\|228909926\|ref\|ZP_04073747.1\| ADP-ribose pyrophosphatase [Bacillus thuringiensis IBL 200], gi\|2288...	2.0E-41	[1..179]	[1..179]
gi\|47568152, gi\|... - gi\|47568152\|ref\|ZP_00238856.1\| MutT/nudix family protein [Bacillus cereus G9241], gi\|47555142\|gb\|EAL... gi\|228987288, gi... - gi\|228987288\|ref\|ZP_04147409.1\| ADP-ribose pyrophosphatase [Bacillus thuringiensis serovar tochigien... gi\|228625637, gi... - gi\|229157680\|ref\|ZP_04285755.1\| ADP-ribose pyrophosphatase [Bacillus cereus ATCC 4342], gi\|228625637...	3.0E-41	[1..179]	[1..179]
gi\|228974180, gi... - gi\|228974180\|ref\|ZP_04134750.1\| ADP-ribose pyrophosphatase [Bacillus thuringiensis serovar thuringie... gi\|228799385, gi... - gi\|228960361\|ref\|ZP_04122014.1\| ADP-ribose pyrophosphatase [Bacillus thuringiensis serovar pakistani... gi\|228818407, gi... - gi\|228941248\|ref\|ZP_04103801.1\| ADP-ribose pyrophosphatase [Bacillus thuringiensis serovar berliner ... gi\|229129375, gi... - gi\|229129375\|ref\|ZP_04258346.1\| ADP-ribose pyrophosphatase [Bacillus cereus BDRD-Cer4], gi\|228653980... gi\|229111570, gi... - gi\|229111570\|ref\|ZP_04241121.1\| ADP-ribose pyrophosphatase [Bacillus cereus Rock1-15], gi\|228671952\|... gi\|229047789, gi... - gi\|229047789\|ref\|ZP_04193369.1\| ADP-ribose pyrophosphatase [Bacillus cereus AH676], gi\|228723581\|gb\|... gi\|228980771, gi... - gi\|228980771\|ref\|ZP_04141076.1\| ADP-ribose pyrophosphatase [Bacillus thuringiensis Bt407], gi\|228778... gi\|30022181, gi\|... - gi\|30022181\|ref\|NP_833812.1\| ADP-ribose pyrophosphatase [Bacillus cereus ATCC 14579], gi\|29897738\|gb... gi\|229152297, gi... - gi\|229152297\|ref\|ZP_04280490.1\| ADP-ribose pyrophosphatase [Bacillus cereus m1550], gi\|228631259\|gb\|... gi\|229146671, gi... - gi\|229146671\|ref\|ZP_04275038.1\| ADP-ribose pyrophosphatase [Bacillus cereus BDRD-ST24], gi\|228636841...	6.0E-41	[1..179]	[1..179]
gi\|42739137, gi\|... - gi\|42783209\|ref\|NP_980456.1\| mutT/nudix family protein [Bacillus cereus ATCC 10987], gi\|42739137\|gb\|...	9.0E-41	[1..179]	[1..179]
gi\|89151120, gi\|... - gi\|89200739\|ref\|ZP_01179489.1\| NUDIX hydrolase [Bacillus cereus subsp. cytotoxis NVH 391-98], gi\|891...	2.0E-40	[1..179]	[1..179]
gi\|88944793, gi\|... - gi\|88944793\|ref\|ZP_01148017.1\| NTP pyrophosphohydrolases including oxidative damage repair enzymes [...	1.0E-39	[1..174]	[1..172]
gi\|251810916, gi... - gi\|251810916\|ref\|ZP_04825389.1\| ADP-ribose diphosphatase [Staphylococcus epidermidis BCM-HMP0060], g... gi\|57866974, gi\|... - gi\|57866974\|ref\|YP_188639.1\| MutT/nudix family protein [Staphylococcus epidermidis RP62A], gi\|576376... gi\|27468101, gi\|... - gi\|27468101\|ref\|NP_764738.1\| ADP-ribose pyrophosphatase [Staphylococcus epidermidis ATCC 12228], gi\|...	7.0E-39	[4..178]	[3..175]
gi\|23099306, gi\|... - gi\|23099306\|ref\|NP_692772.1\| ADP-ribose pyrophosphatase [Oceanobacillus iheyensis HTE831], gi\|227775...	1.0E-38	[1..179]	[1..180]
gi\|153202958, gi... - gi\|254931862\|ref\|ZP_05265221.1\| hypothetical protein LmonH_05512 [Listeria monocytogenes HPB2262], g... gi\|46881469, gi\|... - gi\|46908199\|ref\|YP_014588.1\| MutT/nudix family protein [Listeria monocytogenes str. 4b F2365], gi\|46... gi\|47093295, gi\|... - gi\|47093295\|ref\|ZP_00231065.1\| MutT/nudix family protein [Listeria monocytogenes str. 4b H7858], gi\|... gi\|254825538 - gi\|254825538\|ref\|ZP_05230539.1\| hypothetical protein LmonFS_10249 [Listeria monocytogenes FSL J1-194... gi\|226224570, gi... - gi\|226224570\|ref\|YP_002758677.1\| hypothetical protein Lm4b_01984 [Listeria monocytogenes Clip81459],... gi\|255522141 - gi\|255522141\|ref\|ZP_05389378.1\| hypothetical protein LmonocFSL_13145 [Listeria monocytogenes FSL J1-... gi\|254852868 - gi\|254852868\|ref\|ZP_05242216.1\| hypothetical protein LmonoFSL_06071 [Listeria monocytogenes FSL R2-5...	2.0E-38	[1..178]	[1..178]

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Predicted Domain #1

Region A:
Residues: [1-179]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNLAERTVK TEPIFDGRVI KVRVDDVVLP NGAMSKREIV NHPGAVAIIA ITDEGKIVLV  60
   61 EQYRKALEKA IIEIPAGKLE PGEKPEVTAV RELEEETGYV CENMELITSF YTSPGFADEI 120
  121 LYVYKATGLT KKENKAALDE DEFVELMEVS LEEATTLMKD LRIHDAKTMF AVQYLQLQK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	31.0
Match:	1mk1A
Description:	Structure of the MT-ADPRase in complex with ADPR, a Nudix enzyme
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	1.49075808737475	bayes_pls_golite062009
hydrolase activity	0.914814648797509	bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides	0.60834739024706	bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	0.608343780811364	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: