YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|119606378, gi...
Organism: Homo sapiens
Length: 813 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|119606378, gi....

Description E-value Query
Range
Subject
Range
gi|73948769, gi|... - gi|73948769|ref|XP_859232.1| PREDICTED: similar to enhancer of polycomb 1 isoform 5 [Canis familiari...
0.0 [1..813] [1..813]
gi|22328090 - gi|22328090|gb|AAH36529.1| EPC1 protein [Homo sapiens]
0.0 [1..813] [1..813]
gi|114629987 - gi|114629987|ref|XP_001141530.1| PREDICTED: enhancer of polycomb 1 isoform 3 [Pan troglodytes]
0.0 [1..813] [1..819]
gi|109505900 - gi|109505900|ref|XP_001059000.1| PREDICTED: similar to enhancer of polycomb homolog 1 isoform 2 isof...
0.0 [1..813] [1..812]
EPC1_MOUSE - Enhancer of polycomb homolog 1 OS=Mus musculus GN=Epc1 PE=1 SV=1
0.0 [1..813] [1..813]

Back

Predicted Domain #1
Region A:
Residues: [1-65]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKLSFRARA LDASKPLPVF RCEDLPDLHE YASINRAVPQ MPTGMEKEEE SEHHLQRAIS  60
   61 AQQVY

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [66-286]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GEKRDNMVIP VPEAESNIAY YESIYPGEFK MPKQLIHIQP FSLDAEQPDY DLDSEDEVFV  60
   61 NKLKKKMDIC PLQFEEMIDR LEKGSGQQPV SLQEAKLLLK EDDELIREVY EYWIKKRKNC 120
  121 RGPSLIPSVK QEKRDGSSTN DPYVAFRRRT EKMQTRKNRK NDEASYEKML KLRRDLSRAV 180
  181 TILEMIKRRE KSKRELLHLT LEIMEKRYNL GDYNGEIMSE V

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [287-385]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQRQPMKPT YAIPIIPITN SSQFKHQEAM DVKEFKVNKQ DKADLIRPKR KYEKKPKVLP  60
   61 SSAAATPQQT SPAALPVFNA KDLNQYDFPS SDEEPLSQV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 24.30103
Match: 2d9eA
Description: No description for 2d9eA was found.

Predicted Domain #4
Region A:
Residues: [386-549]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LSGSSEAEED NDPDGPFAFR RKAGCQYYAP HLDQTGNWPW TSPKDGGLGD VRYRYCLTTL  60
   61 TVPQRCIGFA RRRVGRGGRV LLDRAHSDYD SVFHHLDLEM LSSPQHSPVN QFANTSETNT 120
  121 SDKSFSKDLS QILVNIKSCR WRHFRPRTPS LHDSDNDELS CRKL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [550-651]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YRSINRTGTA QPGTQTCSTS TQSKSSSGSA HFAFTAEQYQ QHQQQLALMQ KQQLAQIQQQ  60
   61 QANSNSSTNT SQGFVSKTLD SASAQFAASA LVTSEQLMGF KM

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [652-813]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KDDVVLGIGV NGVLPASGVY KGLHLSSTTP TALVHTSPST AGSALLQPSN ITQTSSSHSA  60
   61 LSHQVTAANS ATTQVLIGNN IRLTVPSSVA TVNSIAPINA RHIPRTLSAV PSSALKLAAA 120
  121 ANCQVSKVPS SSSVDSVPRE NHESEKPALN NIADNTVAME VT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle