YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|119606378, gi...
Organism: Homo sapiens
Length: 813 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|119606378, gi....

Description E-value Query
Range
Subject
Range
gi|73948769, gi|... - gi|73948769|ref|XP_859232.1| PREDICTED: similar to enhancer of polycomb 1 isoform 5 [Canis familiari...
0.0 [1..813] [1..813]
gi|22328090 - gi|22328090|gb|AAH36529.1| EPC1 protein [Homo sapiens]
0.0 [1..813] [1..813]
gi|114629987 - gi|114629987|ref|XP_001141530.1| PREDICTED: enhancer of polycomb 1 isoform 3 [Pan troglodytes]
0.0 [1..813] [1..819]
gi|109505900 - gi|109505900|ref|XP_001059000.1| PREDICTED: similar to enhancer of polycomb homolog 1 isoform 2 isof...
0.0 [1..813] [1..812]
EPC1_MOUSE - Enhancer of polycomb homolog 1 OS=Mus musculus GN=Epc1 PE=1 SV=1
0.0 [1..813] [1..813]

Back

Predicted Domain #1
Region A:
Residues: [1-65]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKLSFRARA LDASKPLPVF RCEDLPDLHE YASINRAVPQ MPTGMEKEEE SEHHLQRAIS  60
   61 AQQVY

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [66-286]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GEKRDNMVIP VPEAESNIAY YESIYPGEFK MPKQLIHIQP FSLDAEQPDY DLDSEDEVFV  60
   61 NKLKKKMDIC PLQFEEMIDR LEKGSGQQPV SLQEAKLLLK EDDELIREVY EYWIKKRKNC 120
  121 RGPSLIPSVK QEKRDGSSTN DPYVAFRRRT EKMQTRKNRK NDEASYEKML KLRRDLSRAV 180
  181 TILEMIKRRE KSKRELLHLT LEIMEKRYNL GDYNGEIMSE V

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [287-385]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQRQPMKPT YAIPIIPITN SSQFKHQEAM DVKEFKVNKQ DKADLIRPKR KYEKKPKVLP  60
   61 SSAAATPQQT SPAALPVFNA KDLNQYDFPS SDEEPLSQV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 24.30103
Match: 2d9eA
Description: No description for 2d9eA was found.

Predicted Domain #4
Region A:
Residues: [386-549]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LSGSSEAEED NDPDGPFAFR RKAGCQYYAP HLDQTGNWPW TSPKDGGLGD VRYRYCLTTL  60
   61 TVPQRCIGFA RRRVGRGGRV LLDRAHSDYD SVFHHLDLEM LSSPQHSPVN QFANTSETNT 120
  121 SDKSFSKDLS QILVNIKSCR WRHFRPRTPS LHDSDNDELS CRKL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [550-651]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YRSINRTGTA QPGTQTCSTS TQSKSSSGSA HFAFTAEQYQ QHQQQLALMQ KQQLAQIQQQ  60
   61 QANSNSSTNT SQGFVSKTLD SASAQFAASA LVTSEQLMGF KM

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [652-813]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KDDVVLGIGV NGVLPASGVY KGLHLSSTTP TALVHTSPST AGSALLQPSN ITQTSSSHSA  60
   61 LSHQVTAANS ATTQVLIGNN IRLTVPSSVA TVNSIAPINA RHIPRTLSAV PSSALKLAAA 120
  121 ANCQVSKVPS SSSVDSVPRE NHESEKPALN NIADNTVAME VT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle