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View Structure Prediction Details

Protein: ELM1_ARATH
Organism: Arabidopsis thaliana
Length: 427 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ELM1_ARATH.

Description E-value Query
Range
Subject
Range
gi|111074344, gi... - gi|42573283|ref|NP_974738.1| unknown protein [Arabidopsis thaliana], gi|222423470|dbj|BAH19705.1| AT...
606.0 [0..22] [427..19]

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Predicted Domain #1
Region A:
Residues: [1-427]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRPILLPDPP SLSTGVPDIF EQGGSHNVVR RAVVIGNGFP GSENQCIGLV RALGLSDNHL  60
   61 LYRVTRPKGG LNEWLHWLPV GFHKKLDFIL RHIYLYSRLM LGSKQSKYIS SVPSENGGNV 120
  121 GLASILEADV KGIVNLARQT YEKDGPLIVI ACGRDTISIA SSIRRLASEN VFVVQIQHPR 180
  181 SHLNRFDMVI TPRHDYYPLT LEAQEQVPRF MRSWITPREP PQDHVVLTTG ALHQIDYASL 240
  241 RKAASAWHDE FAALPKPLVV VNIGWPRSNC RYGADLAKQL TDSLLNVLAT CGSVRITLSY 300
  301 KTPAKVSRVI FKELGDNPKV YIWNGQEPNP YMGHLAWGDA FVVTADSVSL ISEACSTGKP 360
  361 VYVVGADHCK WKIAEFQKSL RERGVVRSFT GFEDMSESWS YPPLNDTAEA ATRIRRELAA 420
  421 RGWSLRS

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.83
Match: 1f0kA
Description: Peptidoglycan biosynthesys glycosyltransferase MurG
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.89798084233658 bayes_pls_golite062009
transferase activity 0.758148981665123 bayes_pls_golite062009
transferase activity, transferring glycosyl groups 0.398470504821598 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle