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View Structure Prediction Details

Protein: gi|36787357, gi|...
Organism: Photorhabdus luminescens subsp. laumondii TTO1
Length: 156 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|36787357, gi|....

Description E-value Query
Range
Subject
Range
gi|75228621 - gi|75228621|ref|ZP_00715246.1| COG0511: Biotin carboxyl carrier protein [Escherichia coli B7A]
141.0 [0..1] [156..1]

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Predicted Domain #1
Region A:
Residues: [1-156]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDIRKIKKLI ELVEESGISE LEISEGEESV RISRALAPQS FPAAQQYIPV QAQQPALANV  60
   61 VAPSQALPEA ISSRSAAIDG HVVRSPMVGT FYRTPSPDAK PFIEIGQRVN VGDTLCIVEA 120
  121 MKMMNQIEAD KAGVVKKILV ESGQPVEFDE PLVVIE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 18.522879
Match: 1a6xA
Description: STRUCTURE OF THE APO-BIOTIN CARBOXYL CARRIER PROTEIN (APO-BCCP87) OF ESCHERICHIA COLI ACETYL-COA CARBOXYLASE, NMR, 49 STRUCTURES
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
acetyl-CoA carboxylase activity 10.7856398099075 bayes_pls_golite062009
CoA carboxylase activity 10.0090741810507 bayes_pls_golite062009
ligase activity, forming carbon-carbon bonds 9.84466409837462 bayes_pls_golite062009
ligase activity 5.03219018024593 bayes_pls_golite062009
catalytic activity 1.39099902011318 bayes_pls_golite062009
dihydrolipoyllysine-residue acetyltransferase activity 0.77123283777817 bayes_pls_golite062009
S-acetyltransferase activity 0.62484336481352 bayes_pls_golite062009
dihydrolipoamide S-acyltransferase activity 0.61155119443764 bayes_pls_golite062009
S-acyltransferase activity 0.14278235106683 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle