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View Structure Prediction Details

Protein: gi|37526401, gi|...
Organism: Photorhabdus luminescens subsp. laumondii TTO1
Length: 219 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|37526401, gi|....

Description E-value Query
Range
Subject
Range
gi|77632233, gi|... - gi|77632233|ref|ZP_00794819.1| COG0235: Ribulose-5-phosphate 4-epimerase and related epimerases and ...
219.0 [0..3] [215..26]

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Predicted Domain #1
Region A:
Residues: [1-219]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYRRCFMSEQ ALRSELVEWA RSMFYRGYSS GGAGNISAKL EDGTIIITPT NSSFGDLQAN  60
   61 RLSKLDAEGN WLSGDKPTKE VSMHLAMYRN RPECHAVVHL HSPWLTALSC LSNLDRSNCL 120
  121 PPITPYYVMR VGKLPLVKYL PPGDERIGEE IAKLAAKHNA ILLSNHGPVV GGKTLRQAFF 180
  181 NAEELEDTAR LYLTLLPHGF TTLNEEQVQE LETRYPKTE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 49.39794
Match: 1dzvP
Description: L-fuculose-1-phosphate aldolase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.58067730905989 bayes_pls_golite062009
aldehyde-lyase activity 0.580063424429242 bayes_pls_golite062009
binding 0.322916243805958 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle