| Protein: | gi|222632751, gi... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 586 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|222632751, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
552.0 | [0..1] | [582..1] |
|
Region A: Residues: [1-317] |
1 11 21 31 41 51
| | | | | |
1 MTTTAAGGAT LCAAREEQEL LATRLNVNGI RPPHCAAESI LIYLTAPGLS MMPMRVMASD 60
61 SIASVKLRVQ TSKGFVVRKQ KLVFDGRELA RNDSRIMDYG VSHGNVLHLV IRISDLRLIT 120
121 VQTVHGNKFR FRVEPGRTVG YVKQQIAKNS THDDDHHSLV LQGEVLDDAH LIHDVCRTDG 180
181 AVIHLLVHRS AKLAARPVDR DFEVSIVARN RNAAADAAQP TLHLQRDFAI EPVIVNPKAA 240
241 LPPVIENLVG AVLAGMEKGN APIMSSEGTG GAYFMQDASG QEHVAVFKPV DEEPMAANNP 300
301 RGLPPSPTGE GLKKGTR
|
| Detection Method: |  |
| Confidence: | 17.154902 |
| Match: | 1oqyA |
| Description: | Structure of the DNA repair protein hHR23a |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.0934358341245259 | bayes_pls_golite062009 |
| protein binding | 0.03789551947602 | bayes_pls_golite062009 |
|
Region A: Residues: [318-437] |
1 11 21 31 41 51
| | | | | |
1 VGEGAIREVA AYILDHPPGG RRSFAGHHGS ATVGFAGVAP TALVRCMHRS FKQPAASEQG 60
61 PPLFKVGSLQ AFVKNSGSCE DMGPRAFPVH EVHKICVLDI RLANADRHAG NILTCRDEQG 120
121
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [438-586] |
1 11 21 31 41 51
| | | | | |
1 HGLTLVPIDH GYCLPESFED CTFEWLYWPQ CREPFSEETV EYIRSLDAEE DIAILRFHGW 60
61 EMPAKCERVL RVTTMLLKKG VDSGLAAFDM GSILCRETLT KESVIEEIIR EVEDDVGDEA 120
121 AFLQSVSQSM DRRLGELSKK KKSNVSIQD
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
