| Protein: | gi|110743039, gi... |
| Organism: | Arabidopsis thaliana |
| Length: | 322 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|110743039, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
251.0 | [0..14] | [319..1] |
|
Region A: Residues: [1-322] |
1 11 21 31 41 51
| | | | | |
1 MNRFSRARSY ISLVLFRKSS YVTSHIPWNQ CFYTSLKSSL KPASVSVSSV HCYSSRSKTA 60
61 KSKMSKSSVS VSDSDKEKDA FFVVRKGDIV GIYKDLIDCQ AQVGSSVYDP PVSVYKGYSL 120
121 LKDTEECLST VGLKKPLYVF RALDLKEDMF GALTPCLFQD QLPSASMSVE KLAELEPSAD 180
181 TSYETCIIEF DGASKGNPGL SGAAAVLKTE DGSLIFKMRQ GLGIATNNAA EYHGLILGLK 240
241 HAIEKGYTKI KVKTDSKLVC MQMKGQWKVN HEVLSKLHKE AKQLSDKCLS FEISHVLRSL 300
301 NSDADEQANM AARLSEGEVE VA
|
| Detection Method: |  |
| Confidence: | 44.39794 |
| Match: | 1rt3A |
| Description: | HIV RNase H (Domain of reverse transcriptase); HIV-1 reverse transcriptase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ribonuclease activity | 3.91517707500372 | bayes_pls_golite062009 |
| endoribonuclease activity | 3.00008907756136 | bayes_pls_golite062009 |
| ribonuclease H activity | 2.37346218921366 | bayes_pls_golite062009 |
| hydrolase activity | 2.30893115816458 | bayes_pls_golite062009 |
| hydrolase activity, acting on ester bonds | 2.26022264830742 | bayes_pls_golite062009 |
| nuclease activity | 1.81796593394339 | bayes_pls_golite062009 |
| endonuclease activity | 1.79009816048707 | bayes_pls_golite062009 |
| catalytic activity | 1.62277843225829 | bayes_pls_golite062009 |
| exoribonuclease activity | 1.48827607538468 | bayes_pls_golite062009 |
| exoribonuclease activity, producing 5'-phosphomonoesters | 1.34153791988846 | bayes_pls_golite062009 |
| 3'-5'-exoribonuclease activity | 0.8085201347205 | bayes_pls_golite062009 |
| exonuclease activity | 0.39213900591465 | bayes_pls_golite062009 |
| endoribonuclease activity, producing 5'-phosphomonoesters | 0.13187450705887 | bayes_pls_golite062009 |
