| Protein: | SR45A_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 382 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SR45A_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
157.0 | [0..17] | [158..48] |
|
Region A: Residues: [1-176] |
1 11 21 31 41 51
| | | | | |
1 MGKREIHFTP VGRQVQRVLE YPLRLENRSP MSYSRRSRYS PSLSPYDKRR GRSVSRSLSR 60
61 SPTRSVSSDA ENPGNSLYVT GLSHRVTERD LEDHFAKEGK VTDVHLVLDP WTRESRGFGF 120
121 ISMKSVGDAN RCIRSLDHSV LQGRVITVEK ARRRRGRTPT PGKYLGLRTA RGRHKS
|
| Detection Method: |  |
| Confidence: | 31.522879 |
| Match: | 1po6A |
| Description: | Crystal Structure of UP1 Complexed With d(TAGG(6MI)TTAGGG): A Human Telomeric Repeat Containing 6-methyl-8-(2-deoxy-beta-ribofuranosyl)isoxanthopteridine (6MI) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.950788308762215 | bayes_pls_golite062009 |
| nucleic acid binding | 0.29562225149076 | bayes_pls_golite062009 |
|
Region A: Residues: [177-276] |
1 11 21 31 41 51
| | | | | |
1 PSYSPRRSVS CSRSRSRSYS SDRGRSYSPS YGRRGRSSSY SPFYRRRRFY SPSRSPSPDD 60
61 RYNRRRDRSY SPYYRRRDRS RSYSRNCRAR DRSPYYMRRY
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [277-382] |
1 11 21 31 41 51
| | | | | |
1 RSRSRSYSPR YRARDRSCSP YYRGRDRSYS PHYQGRDRSY SPESRYYRRH RSVSGSVSPG 60
61 GRSMSRSISP RKGRKESRSK SRRHDRQSSM CHSRSARSST SRSVSP
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
