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View Structure Prediction Details

Protein: INVH_ARATH
Organism: Arabidopsis thaliana
Length: 633 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for INVH_ARATH.

Description E-value Query
Range
Subject
Range
gi|6714395 - gi|6714395|gb|AAF26084.1|AC012393_10 putative alkaline/neutral invertase [Arabidopsis thaliana]
569.0 [0..12] [633..1]

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Predicted Domain #1
Region A:
Residues: [1-118]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNAITFLGNS TMIPSQCILR AFTRISPSKY IRDTSFRSYP SRFSSCINQY RNADSDRIIR  60
   61 PTNAVPFCTD RQSSVTAQVV SEARSHSAST TCANDTTLDQ IYTKNGLNVK PLVVERLK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [119-633]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RDEKDEEAVN EDEEGVKRDG FEGVKCNDVE EEAWRLLRDS IVTYCDSPVG TVAAKDPTDT  60
   61 TPSNYDQVFI RDFVPSALAF LLKGESEIVR NFLLHTLQLQ SWEKTVDCYS PGQGLMPASF 120
  121 KVRTLPLEED KFEEVLDPDF GEAAIGRVAP VDSGLWWIIL LRAYGKITGD YSLQERIDVQ 180
  181 TGIKMIANLC LADGFDMFPT LLVTDGSCMI DRRMGIHGHP LEIQALFYSA LRSSREMITV 240
  241 NDSSKNIIKT ISNRLSALSF HIRENYWVDK NKINEIYRYK TEEYSMDATN KFNIYPEQVS 300
  301 PWLMDWVPES PDSGFLIGNL QPAHMDFRFF TLGNLWSIIS SLGTPKQNQA ILNLVEEKWD 360
  361 DLVGHMPLKI CYPALESSEW HIITGSDPKN TPWSYHNGGS WPTLLWQFTL ACIKMGRPEL 420
  421 AEKAVTLAEK RLQADRWPEY YDTRDGKFIG KQSRLYQTWT IAGFLTSKQL LQNPEIASSL 480
  481 FWEEDLELLE SCVCVLTKSG RKKCSRAAAK SQILI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 30.0
Match: 1v7vA
Description: Crystal structure of Vibrio proteolyticus chitobiose phosphorylase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.632799902740898 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle